Parental gene:

HNRNPAB, ENSOGAG00000030251

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:5034]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873780.1:703601..710620(+)


>ENSOGAG00000030251
ATGTCGGAAGCGAGTGAAGAACAGCCAATGGAGACGACGGGCGCCACCGAGAACGGACATGAGGCAGCCCCCGAAAGCGA
GTCGCCGGCTGGGGCTGGCACCGGGGCCGCGGTGGGGGCTGGAGGCGGGACCGCAGCGCCCCCGAGCGGGAATCAGAACG
GCGCCGAGGGTGACCAGATCAACGCCAGCAAGAATGAGGAGGACGCGGGGAAAATGTTTGTCGGTGGCCTGAGTTGGGAT
ACCAGTAAGAAAGATTTAAAAGACTATTTTACTAAATTTGGAGAGGTCGTTGACTGTACAATAAAAATGGATCCCAACAC
TGGACGATCAAGAGGGTTTGGGTTTATCCTCTTCAAAGATGCAGCCAGTGTGGAGAAGGTCCTAGACCAGAAGGAGCACA
GGCTGGATGGCCGTGTCATTGATCCTAAAAAGGCAATGGCTATGAAGAAGGACCCGGTAAAGAAAATCTTTGTAGGGGGT
CTGAATCCTGAAGCTACTGAGGAAAAGATCAGGGAGTACTTCGGAGACTTTGGGGAGATCGAAGCCATTGAGCTTCCAAT
GGATCCAAAGTTGAACAAGAGACGAGGTTTTGTCTTTATCACCTTTAAAGAAGAAGAACCTGTGAAGAAGGTTCTGGAAA
AAAAGTTCCATACTATCAGTGGAAGCAAGTGTGAAATCAAGGTGGCCCAGCCCAAAGAGGTCTATCAGCAGCAGCAGTAT
GGCTCTGGAGGCCGTGGAAACCGCAACCGGGGGAACCGAGGCAGCGGTGGCGGCGGTGGTGGTGGAGGTCAGAGTCAGAG
TTGGAATCAGGGCTACGGCAACTACTGGAACCAGGGCTACGGCTACCAGCAGGGCTACGGGCCCGGCTATGGCGGCTACG
ACTACTCGCCCTATGGCTATTACGGCTACGGCCCCGGCTACGACTACAGTCAGGGCAGTACAAACTACGGCAAGAGCCAG
CGACGTGGTGGCCATCAGAATAATTACAAGCCATACTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000241 ortholog_one2one 2 retrogenes
retro_cfam_408, retro_cfam_412,
Homo sapiens ENSG00000197451 ortholog_one2one 1 retrogene
retro_hsap_962,
Loxodonta africana ENSLAFG00000001189 ortholog_one2one 1 retrogene
retro_lafr_405,
Macropus eugenii ENSMEUG00000007909 ortholog_one2one 2 retrogenes
retro_meug_169, retro_meug_246,
Myotis lucifugus ENSMLUG00000003380 ortholog_one2one 2 retrogenes
retro_mluc_2024, retro_mluc_2138,
Nomascus leucogenys ENSNLEG00000015775 ortholog_one2one 1 retrogene
retro_nleu_1611,
Oryctolagus cuniculus ENSOCUG00000026424 ortholog_one2one 3 retrogenes
retro_ocun_1800, retro_ocun_1811, retro_ocun_950,
Otolemur garnettii ENSOGAG00000002501 within_species_paralog 4 retrogenes
retro_ogar_2717, retro_ogar_2791, retro_ogar_437, retro_ogar_693,
Otolemur garnettii ENSOGAG00000015353 within_species_paralog 3 retrogenes
retro_ogar_1384, retro_ogar_3077, retro_ogar_3189,
Otolemur garnettii ENSOGAG00000025948 other_paralog 3 retrogenes
retro_ogar_1685, retro_ogar_3010, retro_ogar_3175,
Otolemur garnettii ENSOGAG00000028132 other_paralog 7 retrogenes
retro_ogar_1869, retro_ogar_1924, retro_ogar_2222, retro_ogar_2590, retro_ogar_3215, retro_ogar_600, retro_ogar_814,
Otolemur garnettii ENSOGAG00000029707 other_paralog 3 retrogenes
retro_ogar_1721, retro_ogar_205, retro_ogar_2321,
Pongo abelii ENSPPYG00000016107 ortholog_one2one 1 retrogene
retro_pabe_821,
Pan troglodytes ENSPTRG00000017601 ortholog_one2one 1 retrogene
retro_ptro_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_385 78.43 60.54
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2. retro_ogar_3509 73.12 74.40
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Download FASTA sequences of all ENSOGAG00000030251 retrocopies