Parental gene:

CYP51A1, ENSPPYG00000017824

Aliases:None
Description:Lanosterol 14-alpha demethylase [Source:UniProtKB/Swiss-Prot;Acc:Q5RE72]
Organism:Orangutan (Pongo abelii)
Coordinates:7:84017487..84039945(+)


>ENSPPYG00000017824
ATGGCTGCGGCGGCCGGGATGATGCTGCTGGGCTTGCTGCAGGCGGGTGGGTCGGTGCTGGGCCAGGCGATGGAGAAGGT
GACGGGCGGCAACCTCTTGTCCATGCTGCTGATCGCCTGCGCCTTCACCCTCAGCCTGGTCTACCTGTTCCGTCTCGCCG
TCGGCCACCTGGTCCAGCTGCCCGCAGGGGCGAAAAGTCCTCCATACATTTTCTCCCCAATTCCATTCCTTGGGCATGCC
ATAGCATTTGGGAAAAGTCCAATTGAATTTCTAGAAAATGCATATGAGAAGTATGGACCTGTATTTAGTTTTACCATGGT
AGGCAAGACATTTACTTACCTTCTGGGGAGTGATGCTGCTGCACTGCTTTTTAATAGTAAAAATGAAGACCTGAATGCAG
AAGATGTCTACAGTCGCCTGACAACACCTGTGTTTGGGAAGGGAGTTGCATACGATGTGCCTAATCCAGTTTTCTTGGAG
CAGAAGAAAATGTTAAAAAGTGGCCTTAACATAGCCCACTTTAAACAGCATGTTTCTATAATTGAAAAAGAAACAAAGGA
ATACTTTGAGAGTTGGGGAGAAAGTGGAGAAAAAAATGTGTTTGAAGCTCTTTCTGAGCTCATAATTTTAACAGCTAGCC
ATTGTTTGCATGGAAAGGAAGTCAGAAGTCAACTCAATGAAAAGGTAGCACAGCTGTATGCAGATTTGGATGGAGGTTTC
AGCCATGCAGCCTGGCTCTTACCAGGTTGGCTGCCTTTGCCTAGTTTCAGACGCAGGGACAGAGCTCATCGGGAAATCAA
GGATATTTTCTATAAGGCAATCCAGAAACGCAGACAGTCTCAAGAAAAAATTGATGACATTCTCCAAACTTTACTAGATG
CTACATACAAGGATGGGCGTCCTTTGACTGATGATGAAGTAGCAGGGATGCTTATTGGATTACTCTTGGCAGGGCAGCAT
ACATCCTCAACTACTAGTGCTTGGATGGGCTTCTTTTTAGCCAGAGACAAAACACTTCAAGAAAAATGTTATTTAGAACA
GAAAACAGTCTGTGGAGAGAATCTGCCTCCTTTAACTTATGACCAGCTCAAGGATCTAAATTTACTTGATCGCTGTATAA
AAGAAACATTAAGACTTAGACCTCCTATAATGATCATGATGAGAATGGCCAGAACTCCTCAGACTGTGGCAGGGTATACC
ATTCCTCCAGGACATCAGGTGTGTGTTTCTCCCACTGTCAATCAAAGACTTAAAGACTCATGGGTAGAACGCCTGGACTT
TAATCCTGATCGCTACTTACAGGATAACCCAGCATCAGGGGAAAAGTTTGCCTATGTGCCATTTGGAGCTGGGCGTCATC
GTTGTATTGGGGAAAATTTTGCCTATGTTCAAATTAAGACAATTTGGTCCACTATGCTTCGTTTATATGAATTTGATCTC
ATTGATGGATACTTTCCCACTGTGAATTATACAACTATGATTCACACCCCTGAAAACCCAGTTATCCGTTACAAACGAAG
ATCAAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .61 RPM
SRP007412_cerebellum 30 .52 RPM
SRP007412_heart 22 .91 RPM
SRP007412_kidney 36 .59 RPM
SRP007412_liver 60 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005722 ortholog_one2one 1 retrogene
retro_amel_1512,
Homo sapiens ENSG00000001630 ortholog_one2one 2 retrogenes
retro_hsap_1248, retro_hsap_2807,
Loxodonta africana ENSLAFG00000000066 ortholog_one2one 1 retrogene
retro_lafr_272,
Monodelphis domestica ENSMODG00000010610 ortholog_one2one 1 retrogene
retro_mdom_436,
Pan troglodytes ENSPTRG00000019391 ortholog_one2one 2 retrogenes
retro_ptro_1901, retro_ptro_859,
Tarsius syrichta ENSTSYG00000014341 ortholog_one2one 1 retrogene
retro_tsyr_1008,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1039 94.52 100.00
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2. retro_pabe_1040 93.22 72.10
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Download FASTA sequences of all ENSPPYG00000017824 retrocopies