Parental gene:

PSAT1, ENSPPYG00000019313

Aliases:None
Description:phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:19129]
Organism:Orangutan (Pongo abelii)
Coordinates:9:73291999..73324871(+)


>ENSPPYG00000019313
ATGGGGCGCCGACTCGGCGCTGTAACAAGGCGGGGGTTCGGAGCCGGCTGCAGACTCTCACCGCAGCGTCCAGGAACGCC
AGCCGTTCACGCGTTCGGTCCTCCTTGGCTGACTCACCGCCCTCGCCGCCGCACCATGGACGCCCCCAGGCAGGTGGTCA
ACTTTGGGCCTGGTCCCGCCAAGCTGCCCCACTCAGTGTTGTTAGAGATACAAAAGGAATTATTAGACTACAAAGGAGTT
GGCATTAGTGTTCTTGAAATGAGTCACAGGTCATCAGATTTTGCCAAGATTATTAACAATACAGAGAATCTTGTGCGGGA
ATTGCTAGCTGTTCCAGACAACTATAAGGTGATTTTTTTGCAAGGAGGTGGGTCCGGCCAGTTCAGTGCTGTCCCCTTAA
ACCTGATTGGCTTGAAAGCAGGAAGGTGTGCGGACTATGTGGTGACAGGAGCTTGGTCAGCTAAGGCCGCAGAAGAAGCC
AAGAAGTTTGGGACTATAAATATCGTTCACCCTAAACTTGGGAGTTATACAAAAATTCCAGATCCAAGCACCTGGAACCT
CAACCCAGATGCCTCCTACGTGTATTATTGCGCAAATGAGACGGTGCATGGTGTGGAGTTTGACTTTATACCCGATGTCA
AGGGAGCAGTACTGGTTTGTGACATGTCCTCAAACTTCCTGTCCAAGCCAGTGGATGTTTCCAAGTTTGGTGTGATTTTT
GCTGGTGCCCAGAAGAATGTTGGCTCTGCTGGGGTCACCGTGGTGATTGTCCGTGATGACCTGCTGGGGTTTGCCCTCCG
AGAGTGCCCCTCGGTCCTGGAATACAAGGTGCAGGCTGGAAACAGCTCCTTGTACAACACGCCTCCATGTTTCAGCATCT
ACGTCATGGGCTTGGTTCTGGAGTGGATTAAAAACAATGGAGGTGCCACGGCCATGGAGAAGCTTAGCTCCACCAAATCT
CAAACGATTTATGAGATTATTGATAATTCTCAAGGATTCTATGTATGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAA
TATTCCATTCCGCATTGGCAATGCCAAAGGAGATGATGCTTTAGAAAAAAGATTTCTTGATAAAGCTCTTGAACTCAATA
TGTTGTCCTTGAAAGGGCATAGGTCTGTGGGAGGCATCCGGGCCTCTCTGTATAATGCTGTCACAATTGAAGATGTTCAG
AAGCTGGCCGCCTTTATGAAAAAATTTTTGGAGATGCATCAGCTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .88 RPM
SRP007412_cerebellum 10 .21 RPM
SRP007412_heart 0 .33 RPM
SRP007412_kidney 74 .61 RPM
SRP007412_liver 29 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006898 ortholog_one2many 1 retrogene
retro_amel_375,
Bos taurus ENSBTAG00000013960 ortholog_one2one 1 retrogene
retro_btau_1658,
Canis familiaris ENSCAFG00000001570 ortholog_one2one 1 retrogene
retro_cfam_269,
Choloepus hoffmanni ENSCHOG00000003817 ortholog_one2one 1 retrogene
retro_chof_2702,
Callithrix jacchus ENSCJAG00000003319 ortholog_one2many 1 retrogene
retro_cjac_1203,
Echinops telfairi ENSETEG00000004158 ortholog_one2one 1 retrogene
retro_etel_99,
Homo sapiens ENSG00000135069 ortholog_one2one 3 retrogenes
retro_hsap_2267, retro_hsap_4054, retro_hsap_412,
Loxodonta africana ENSLAFG00000017917 ortholog_one2one 2 retrogenes
retro_lafr_1249, retro_lafr_660,
Macaca mulatta ENSMMUG00000011868 ortholog_one2many 2 retrogenes
retro_mmul_1029, retro_mmul_2341,
Mustela putorius furo ENSMPUG00000012566 ortholog_one2one 1 retrogene
retro_mputfur_808,
Nomascus leucogenys ENSNLEG00000002989 ortholog_one2one 3 retrogenes
retro_nleu_1010, retro_nleu_1288, retro_nleu_2805,
Oryctolagus cuniculus ENSOCUG00000007765 ortholog_one2one 1 retrogene
retro_ocun_1092,
Pan troglodytes ENSPTRG00000021045 ortholog_one2one 2 retrogenes
retro_ptro_1606, retro_ptro_316,
Rattus norvegicus ENSRNOG00000013971 ortholog_one2one 1 retrogene
retro_rnor_1663,
Tupaia belangeri ENSTBEG00000012946 ortholog_one2one 1 retrogene
retro_tbel_1577,
Tarsius syrichta ENSTSYG00000000093 ortholog_one2one 2 retrogenes
retro_tsyr_1073, retro_tsyr_1212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_308 89.52 50.60
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pabe_1950 61.97 54.94
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_pabe_3328 87.84 61.45
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000019313 retrocopies