Parental gene:

MSL3, ENSPPYG00000020123

Aliases:MSL3, MSL3L1
Description:Male-specific lethal 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q5R6Y9]
Organism:Orangutan (Pongo abelii)
Coordinates:X:11626862..11644570(+)


>ENSPPYG00000020123
ATGAGCGCGAGCGAGGGCATGAAATTTAAATTCCACTCAGGGGAGAAAGTGCTGTGCTTCGAGCCTGACCCCACCAAGGC
GCGAGTGCTGTACGATGCCAAGATTGTTGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGA
TCCATTTTAATGGTTGGAACAGAAGCTGGGATAGATGGGCAGCCGAAGATCATGTGCTTCGTGATACCGATGAAAATCGT
AGATTACAGCGTAAATTGGCAAGAAAAGCTGTAGCTCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCC
TGGTGTTGACTCTGTCTTAAAAGGCCTCCCCACTGAAGAAAAAGATGAAAATGATGAAAACTCATTAAGCAGTTCCTCTG
ACTGTAGTGAAAACAAGGATGAAGAAATAAGTGAAGAAAGTGATATTGAAGAAAAGACTGAAGTGAAAGAAGAACCAGAG
CTTCAAACAAGAAGGGAAATGGAAGAAAGAACAATAACTATAGAAATCCCTGAAGTTCTGAAGAAGCAGCTGGAGGATGA
TTGTTACTACATTAACAGGAGGAAACGGTTAGTGAAACTTCCATGCCAGACCAACATCATAACGATTTTGGAATCCTATG
TGAAGCATTTTGCTATCAATGCAGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGTTATGCCACATGCCAACATG
AATGTGCATTATATCCCAGCAGAAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACCTTTGATTA
CACTCTCCCGTTGGTTTTACTCTATCCGTATGAACAAGCTCAGTATAAAAAGGTGACTTCGTCTAAGTTTTTTCTTCCAA
TTAAGGAAAGTGCCACAAGCACTAACAGGAGCCAGGAGGAACTCTCTCCCAGCCCGCCTTTGTTGAATCCATCCACGCCA
CAGTCCACAGAGAGTCAGCCGACCACCGGTGAACCAGCCACCCCCAAAAGGCGCAAAGCTGAGCCAGAAGCATTGCAGTC
GCTGAGGCGGTCCACGCGCCACAGTGCCAACTGTGACAGGCTTTCTGAGAGCAGCGCTTCACCTCAGCCCAAGCGCCGGC
AGCAGGACACGTCCGGCAGCATGCCCAAGCTCTTCCTGCACCTGGAAAAGAAGACACCTGTGCATAGCAGATCATCTTCA
CCTATTCCTCTGACTCCTAGCAAGGAAGGGAGTGCTGTGTTTGCTGGCTTTGAAGGGAGAAGAACTAATGAAATAAACGA
GGTCCTCTCCTGGAAGCTTGTGCCTGACAATTACCCGCCAGGTGACCAGCCGCCTCCACCCTCTTACATTTACGGGGCAC
AACATTTGCTGCGATTGTTTGTGAAACTTCCAGAAATCCTTGGTAAGATGTCCTTTTCTGAGAAGAATCTGAAGGCTTTA
TTGAAGCACTTTGATCTCTTTTTGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCGGCTTACGTCGCTGC
CTGTGAGGCACATTACAGCACCAAGAACCCCCGGGCAATTTATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .86 RPM
SRP007412_cerebellum 14 .96 RPM
SRP007412_heart 5 .36 RPM
SRP007412_kidney 10 .24 RPM
SRP007412_liver 8 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009278 ortholog_one2one 1 retrogene
retro_btau_883,
Callithrix jacchus ENSCJAG00000001061 ortholog_one2one 1 retrogene
retro_cjac_1490,
Cavia porcellus ENSCPOG00000004692 ortholog_one2many 5 retrogenes
retro_cpor_1423, retro_cpor_1424, retro_cpor_1425, retro_cpor_1426, retro_cpor_95,
Homo sapiens ENSG00000005302 ortholog_one2one 2 retrogenes
retro_hsap_2401, retro_hsap_4097,
Gorilla gorilla ENSGGOG00000006582 ortholog_one2one 2 retrogenes
retro_ggor_1820, retro_ggor_2749,
Macaca mulatta ENSMMUG00000002689 ortholog_one2one 2 retrogenes
retro_mmul_2362, retro_mmul_972,
Monodelphis domestica ENSMODG00000017350 ortholog_one2one 1 retrogene
retro_mdom_1422,
Pan troglodytes ENSPTRG00000021662 ortholog_one2one 2 retrogenes
retro_ptro_1751, retro_ptro_2778,
Pteropus vampyrus ENSPVAG00000005000 ortholog_one2one 1 retrogene
retro_pvam_203,
Sorex araneus ENSSARG00000008477 ortholog_one2one 1 retrogene
retro_sara_139,
Tarsius syrichta ENSTSYG00000012788 ortholog_one2one 4 retrogenes
retro_tsyr_1079, retro_tsyr_1649, retro_tsyr_1706, retro_tsyr_948,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2166 86.26 84.64
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pabe_3353 67.89 72.17
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000020123 retrocopies