Parental gene: | TAF1, ENSPPYG00000020453 |
| Aliases: | None |
| Description: | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa [Source:HGNC Symbol;Acc:11535] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | X:68872418..68964839(+) |
>ENSPPYG00000020453
TATGATGAAGATGACTATGATGCTGATTGTGAAGACATTGATTGCAAGTTGATGCCTCCTCCACCTCCACCCCCGGGACC
AATGAAGAAGGATAAGGACCAGGATGCTATTACCAGTGTGTCTGAAAATGGAGAAGGCATCATCTTGCCCTCCATCATTG
CCCCTTCCTCTTTGGCCTCAGAGAAAGTGGACTTCAGTAGTTCTTCTGACTCAGAATCTGAGATGGGACCTCAGGAAGCA
ACACAGGCAGAATCTGAGGATGGAAAGCTGACCCTTCCATTGGCTGGGATTATGCAGCATGATGCCACCAAGCTGTTGCC
AAGTGTCACAGAACTTTTTCCAGAATTTCGACCTGGAAAGGTGTTACGCTTTCTACGTCTTTTTGGACCAGGGAAGAATG
TCCCATCTGTTTGGCGGAGTGCTCGGAGAAAGAGGAAGAAGAAGCACCGTGAGCTGATACAGGAAGAGCAGATCCAGGAG
GTGGAATGCTCAGTAGAATTAGAAGTCAGCCAGAAGTCTTTGTGGAACTACGACTACGCTCCACCACCACCTCCAGAGCA
GTGTCTCTCTGATGATGAAATCACGATGATGGCTCCTGTGGAGTCCAAATTTTCCCAATCAACTGGAGATATAGATAAAG
TGACAGATACCAAACCAAGAGTGGCTGAGTGGCGTTATGGGCCTGCCCGACTGTGGTATGATATGCTGGGTGTCCCTGAA
GATGGCAGTGGGTTTGACTATGGCTTCAAACTGAGAAAGACAGAACATGAACCTGTGATAAAATCTAGAATGATAGAGGA
ATTTAGGAAACTTGAGGAAAACAATGGCACTGATCTTCTGGCTGATGAAAACTTCCTGATGGTGACACAGCTGCATTGGG
AGGATGATATCATCTGGGATGGGGAGGATGTCAAACACAAAGGGACAAAACCTCAGCGTGCAAGCCTGGCAGGCTGGCTT
CCTTCTAGCATGACTAGGAATGCGATGGCTTACAATGTTCAGCAAGGTTTTGCAGCCACTCTTGATGATGACAAACCTTG
GTACTCCATTTTTCCCATTGACAATGAGGATCTGGTGTATGGACGCTGGGAGGACAATATCATTTGGGATGCTCAGGCCA
TGCCCCGGCTGTTGGAACCTCCTGTTTTGACCCTTGATCCCAATGATGAGAACCTCATTTTGGAAATTCCTGATGAGAAG
GAAGAGGCCACCTCTAACTCCCCCTCCAAGGAGAGTAAGAAGGAATCATCTCTGAAGAAGAGTCGAATTCTCTTAGGGAA
AACAGGAGTCATCAAGGAGGAACCACAGCAGAACATGTCTCAGCCAGAAGTGAAAGATCCATGGAATCTCTCCAATGATG
AGTATTATTATCCCAAGCAACAGGGTCTTCGAGGCACCTTTGGAGGGAATATTATCCAGCATTCAATTCCTGCTGTGGAA
TTACGGCAGCCCTTCTTTCCCACCCACATGGGGCCCATCAAACTCCGGCAGTTCCATCGCCCACCTCTGAAAAAGTACTC
ATTTGGTGCACTCTCTCAGCCAGGTCCCCACTCAGTCCAACCTTTGCTAAAGCACATCAAAAAAAAGGCCAAGATGAGAG
AACAAGAGAGGCAAGCTTCAGGTGGTGGAGAGATGTTTTTTATGCGCACACCTCAGGACCTCACAGGCAAAGATGGTGAT
CTTATTCTTGCAGAATATAGTGAGGAAAATGGACCCTTAATGATGCAGGTTGGCATGGCAACCAAGATAAAGAACTATTA
TAAACGGAAACCTGGAAAAGATCCTGGAGCACCAGATTGTAAATATGGGGAAACTGTTTACTGCCATACATCTCCTTTCC
TGGGCTCTCTCCATCCTGGCCAATTGCTGCAAGCATTTGAGAACAACCTTTTTCGTGCTCCAATTTATCTTCATAAGATG
CCAGAAACTGATTTCTTGATCATTCGGACAAGACAGGGTTACTATATTCGGGAATTAGTGGATATTTTTGTGGTTGGCCA
GCAGTGTCCCTTGTTTGAAGTTCCTGGGCCTAACTCCAAAAGGGCCAATACGCATATTCGAGACTTTCTACAGGTTTTTA
TTTACCGCCTTTTCTGGAAAAGTAAAGATCGGCCACGGAGGATACGAATGGAAGATATAAAAAAAGCCTTTCCTTCCCAT
TCAGAAAGCAGCATCCGGAAGAGGCTAAAGCTCTGCGCTGACTTCAAACGCACAGGGATGGACTCAAACTGGTGGGTGCT
TAAGTCTGATTTTCGTTTACCAACGGAAGAAGAGATCAGAGCTATGGTGTCACCAGAGCAGTGCTGTGCTTATTATAGCA
TGATAGCTGCAGAGCAACGACTGAAGGATGCTGGCTATGGTGAGAAATCCTTTTTCGCTCCGGAAGAAGAAAATGAGGAA
GATTTCCAGATGAAGATTGATGATGAAGTTCGCACTGCTCCTTGGAACACCACAAGGGCCTTCATTGCTGCCATGAAGGG
CAAGTGTCTGCTAGAGGTGACTGGGGTGGCAGATCCCACGGGGTGTGGTGAAGGATTCTCCTATGTGAAGATTCCAAACA
AACCAACACAGCAGAAGGATGATAAAGAACCACAGCCAGTGAAGAAGACAGTGACAGGAACAGATGCAGACCTTCGTCGC
CTTTCCCTGAAAAATGCCAAGCAACTTCTACGTAAATTTGGTGTGCCTGAGGAAGAGATTAAAAAGTTGTCCCGCTGGGA
AGTGATTGATGTGGTGCGCACAATGTCAACAGAACAGGCTCGTTCTGGAGAGGGGCCCATGAGTAAATTTGCCCGTGGAT
CAAGGTTTTCTGTGGCTGAGCATCAAGAGCGTTACAAAGAGGAATGTCAGCGCATCTTTGACTTACAGAACAAGGTTCTG
TCATCAACTGAAGTCTTATCAACTGACACAGACAGCAGCTCAGCTGAAGATAGTGACTTTGAAGAAATGGGAAAGAACAT
TGAGAACATGTTGCAGAACAAGAAAACCAGCTCTCAGCTGTCACGTGAACGGGAGGAACAGGAGCGGAAGGAACTACAGC
GAATGCTACTGGCAGCAGGCTCAGCAGCATCCGGAAACAATCACAGAGATGATGACACAGCTTCCGTGACTAGCCTTAAC
TCTTCTGCCACTGGACGCTGTCTCAAGATTTATCGCACGTTTCGAGATGAAGAGGGGAAAGAGTATGTTCGCTGTGAGAC
AGTCCGAAAACCAGCTGTCATTGATGCCTATGTGCGCATACGGACTACAAAAGATGAGGAATTCATTCGAAAATTTGCCC
TTTTTGATGAACAACATCGAGAAGAGATGCGAAAAGAACGGCGGAGGATTCAAGAGCAACTGAGGCGGCTTAAGCGGAAC
CAGGAAAAGGAGAAGCTTAAGGGTCCTCCTGAGAAGAAGCCCAAGAAAATGAAGGAGCGTCCTGACCTAAAACTGAAATG
TGGGGCATGTGGTGCCATTGGACACATGAGGACTAACAAATTCTGCCCCCTCTATTATCAAACAAATGCGCCGCCTTCCA
ACCCTGTTGCCATGACAGAAGAACAGGAGGAGGAGTTGGAAAAGACAGTCATTCATAATGACAATGAAGAACTTATCAAG
GTTGAAGGGACCAAAATTGTCTTGGGGAAACAGCTAATTGAGAGTGCGGATGAGGTTCGCAGAAAATCTCTGGTTCTCAA
GTTTCCTAAACAGCAGCTTCCTCCAAAGAAGAAACGGCGAGTTGGAACCACTGTTCATTGTGACTATTTGAATAGACCTC
ATAAGTCCATCCACCGGCGCCGCACAGACCCTATGGTGACGCTGTCATCCATCTTGGAGTCTATCATCAATGACATGAGA
GATCTTCCAAATACATACCCTTTCCACACTCCAGTCAATGCAAAGGTTGTAAAGGACTACTACAAAATCATCACTCGGCC
AATGGACCTACAAACACTCCGCGAAAACGTGCGTAAACGCCTCTACCCATCTCGGGAAGAGTTCAGAGAGCATCTGGAGC
TAATTGTGAAAAATAGTGCAACCTACAATGGGCCAAAACACTCATTGACTCAGATCTCTCAATCCATGCTGGATCTCTGT
GATGAAAAACTCAAAGAGAAAGAAGACAAATTAGCTCGCTTAGAGAAAGCTATCAACCCCTTGCTAGATGATGATGACCA
AGTGGCGTTTTCTTTCATTCTGGACAACATTGTCACCCAGAAAATGATGGCAGTTCCAGATTCTTGGCCATTTCATCACC
CAGTTAATAAGAAATTTGTTCCAGATTATTACAAAGTGATTGTCAATCCAATGGATTTAGAGACCATACGTAAGAACATC
TCCAAGCACAAGTATCAGAGTCGGGAGAGCTTTCTAGATGATGTAAACCTTATTCTGGCCAACAGTGTTAAGTATAATGG
ACCTGAGAGTCAGTATACTAAGACTGCCCAGGAGATTGTGAACGTCTGTTACCAGACATTGACTGAGTATGATGAACATT
TGACTCAACTTGAGAAGGATATTTGTACAGCTAAAGAAGCAGCTTTGGAGGAAGCAGAATTAGAAAGCCTGGACCCAATG
ACCCCAGGGCCCTACACGCCTCAGCCTCCTGATTTGTATGATACCAACACATCCCTCAGTATGTCTCGAGATGCCTCTGT
ATTTCAAGATGAGAGCAATATGTCTGTCTTGGATATTCCCACTGCCACTCCAGAAAAGCAGGTAACACAGGAAGGTGAAG
ATGGAGATGGTGATCTTGCAGATGAAGAGGAAGGAACTGTACAACAGCCTCAAGCCAGTGTCCTGTATGAGGATTTGCTT
ATGTCTGAAGGAGAAGATGATGAGGAAGATGCTGGGAGTGATGAAGAAGGAGACAATCCTTTCTCTGCTATCCAGCTGAG
TGAAAGTGGAAGTGACTCTGATGTAGGATCTGGTGGAATAAGACCCAAACAACCCCGCATGCTTCAGGAGAACACAAGGA
TGGACATGGAAAATGAAGAAAGCATGATGTCCTATGAGGGAGACGGTGGGGAGGCTTCCCATGGTTTGGAGGATAGCAAC
ATCAGTTATGGGAGCTATGAGGAGCCTGATCCCAAGTCGAACACCCAAGACACAAGCTTCAGCAGCATCGGTGGGTATGA
GGTATCAGAGGAGGAAGAAGATGAGGAGGAGGAAGAGCAGCGCTCTGGGCCGAGCGTACTAAGCCAGGTCCACCTGTCAG
AGGACGAGGAGGACAGTGAGGATTTCCACTCCATTGCTGGGGACAGTGACTTGGACTCTGATGAATGA
TATGATGAAGATGACTATGATGCTGATTGTGAAGACATTGATTGCAAGTTGATGCCTCCTCCACCTCCACCCCCGGGACC
AATGAAGAAGGATAAGGACCAGGATGCTATTACCAGTGTGTCTGAAAATGGAGAAGGCATCATCTTGCCCTCCATCATTG
CCCCTTCCTCTTTGGCCTCAGAGAAAGTGGACTTCAGTAGTTCTTCTGACTCAGAATCTGAGATGGGACCTCAGGAAGCA
ACACAGGCAGAATCTGAGGATGGAAAGCTGACCCTTCCATTGGCTGGGATTATGCAGCATGATGCCACCAAGCTGTTGCC
AAGTGTCACAGAACTTTTTCCAGAATTTCGACCTGGAAAGGTGTTACGCTTTCTACGTCTTTTTGGACCAGGGAAGAATG
TCCCATCTGTTTGGCGGAGTGCTCGGAGAAAGAGGAAGAAGAAGCACCGTGAGCTGATACAGGAAGAGCAGATCCAGGAG
GTGGAATGCTCAGTAGAATTAGAAGTCAGCCAGAAGTCTTTGTGGAACTACGACTACGCTCCACCACCACCTCCAGAGCA
GTGTCTCTCTGATGATGAAATCACGATGATGGCTCCTGTGGAGTCCAAATTTTCCCAATCAACTGGAGATATAGATAAAG
TGACAGATACCAAACCAAGAGTGGCTGAGTGGCGTTATGGGCCTGCCCGACTGTGGTATGATATGCTGGGTGTCCCTGAA
GATGGCAGTGGGTTTGACTATGGCTTCAAACTGAGAAAGACAGAACATGAACCTGTGATAAAATCTAGAATGATAGAGGA
ATTTAGGAAACTTGAGGAAAACAATGGCACTGATCTTCTGGCTGATGAAAACTTCCTGATGGTGACACAGCTGCATTGGG
AGGATGATATCATCTGGGATGGGGAGGATGTCAAACACAAAGGGACAAAACCTCAGCGTGCAAGCCTGGCAGGCTGGCTT
CCTTCTAGCATGACTAGGAATGCGATGGCTTACAATGTTCAGCAAGGTTTTGCAGCCACTCTTGATGATGACAAACCTTG
GTACTCCATTTTTCCCATTGACAATGAGGATCTGGTGTATGGACGCTGGGAGGACAATATCATTTGGGATGCTCAGGCCA
TGCCCCGGCTGTTGGAACCTCCTGTTTTGACCCTTGATCCCAATGATGAGAACCTCATTTTGGAAATTCCTGATGAGAAG
GAAGAGGCCACCTCTAACTCCCCCTCCAAGGAGAGTAAGAAGGAATCATCTCTGAAGAAGAGTCGAATTCTCTTAGGGAA
AACAGGAGTCATCAAGGAGGAACCACAGCAGAACATGTCTCAGCCAGAAGTGAAAGATCCATGGAATCTCTCCAATGATG
AGTATTATTATCCCAAGCAACAGGGTCTTCGAGGCACCTTTGGAGGGAATATTATCCAGCATTCAATTCCTGCTGTGGAA
TTACGGCAGCCCTTCTTTCCCACCCACATGGGGCCCATCAAACTCCGGCAGTTCCATCGCCCACCTCTGAAAAAGTACTC
ATTTGGTGCACTCTCTCAGCCAGGTCCCCACTCAGTCCAACCTTTGCTAAAGCACATCAAAAAAAAGGCCAAGATGAGAG
AACAAGAGAGGCAAGCTTCAGGTGGTGGAGAGATGTTTTTTATGCGCACACCTCAGGACCTCACAGGCAAAGATGGTGAT
CTTATTCTTGCAGAATATAGTGAGGAAAATGGACCCTTAATGATGCAGGTTGGCATGGCAACCAAGATAAAGAACTATTA
TAAACGGAAACCTGGAAAAGATCCTGGAGCACCAGATTGTAAATATGGGGAAACTGTTTACTGCCATACATCTCCTTTCC
TGGGCTCTCTCCATCCTGGCCAATTGCTGCAAGCATTTGAGAACAACCTTTTTCGTGCTCCAATTTATCTTCATAAGATG
CCAGAAACTGATTTCTTGATCATTCGGACAAGACAGGGTTACTATATTCGGGAATTAGTGGATATTTTTGTGGTTGGCCA
GCAGTGTCCCTTGTTTGAAGTTCCTGGGCCTAACTCCAAAAGGGCCAATACGCATATTCGAGACTTTCTACAGGTTTTTA
TTTACCGCCTTTTCTGGAAAAGTAAAGATCGGCCACGGAGGATACGAATGGAAGATATAAAAAAAGCCTTTCCTTCCCAT
TCAGAAAGCAGCATCCGGAAGAGGCTAAAGCTCTGCGCTGACTTCAAACGCACAGGGATGGACTCAAACTGGTGGGTGCT
TAAGTCTGATTTTCGTTTACCAACGGAAGAAGAGATCAGAGCTATGGTGTCACCAGAGCAGTGCTGTGCTTATTATAGCA
TGATAGCTGCAGAGCAACGACTGAAGGATGCTGGCTATGGTGAGAAATCCTTTTTCGCTCCGGAAGAAGAAAATGAGGAA
GATTTCCAGATGAAGATTGATGATGAAGTTCGCACTGCTCCTTGGAACACCACAAGGGCCTTCATTGCTGCCATGAAGGG
CAAGTGTCTGCTAGAGGTGACTGGGGTGGCAGATCCCACGGGGTGTGGTGAAGGATTCTCCTATGTGAAGATTCCAAACA
AACCAACACAGCAGAAGGATGATAAAGAACCACAGCCAGTGAAGAAGACAGTGACAGGAACAGATGCAGACCTTCGTCGC
CTTTCCCTGAAAAATGCCAAGCAACTTCTACGTAAATTTGGTGTGCCTGAGGAAGAGATTAAAAAGTTGTCCCGCTGGGA
AGTGATTGATGTGGTGCGCACAATGTCAACAGAACAGGCTCGTTCTGGAGAGGGGCCCATGAGTAAATTTGCCCGTGGAT
CAAGGTTTTCTGTGGCTGAGCATCAAGAGCGTTACAAAGAGGAATGTCAGCGCATCTTTGACTTACAGAACAAGGTTCTG
TCATCAACTGAAGTCTTATCAACTGACACAGACAGCAGCTCAGCTGAAGATAGTGACTTTGAAGAAATGGGAAAGAACAT
TGAGAACATGTTGCAGAACAAGAAAACCAGCTCTCAGCTGTCACGTGAACGGGAGGAACAGGAGCGGAAGGAACTACAGC
GAATGCTACTGGCAGCAGGCTCAGCAGCATCCGGAAACAATCACAGAGATGATGACACAGCTTCCGTGACTAGCCTTAAC
TCTTCTGCCACTGGACGCTGTCTCAAGATTTATCGCACGTTTCGAGATGAAGAGGGGAAAGAGTATGTTCGCTGTGAGAC
AGTCCGAAAACCAGCTGTCATTGATGCCTATGTGCGCATACGGACTACAAAAGATGAGGAATTCATTCGAAAATTTGCCC
TTTTTGATGAACAACATCGAGAAGAGATGCGAAAAGAACGGCGGAGGATTCAAGAGCAACTGAGGCGGCTTAAGCGGAAC
CAGGAAAAGGAGAAGCTTAAGGGTCCTCCTGAGAAGAAGCCCAAGAAAATGAAGGAGCGTCCTGACCTAAAACTGAAATG
TGGGGCATGTGGTGCCATTGGACACATGAGGACTAACAAATTCTGCCCCCTCTATTATCAAACAAATGCGCCGCCTTCCA
ACCCTGTTGCCATGACAGAAGAACAGGAGGAGGAGTTGGAAAAGACAGTCATTCATAATGACAATGAAGAACTTATCAAG
GTTGAAGGGACCAAAATTGTCTTGGGGAAACAGCTAATTGAGAGTGCGGATGAGGTTCGCAGAAAATCTCTGGTTCTCAA
GTTTCCTAAACAGCAGCTTCCTCCAAAGAAGAAACGGCGAGTTGGAACCACTGTTCATTGTGACTATTTGAATAGACCTC
ATAAGTCCATCCACCGGCGCCGCACAGACCCTATGGTGACGCTGTCATCCATCTTGGAGTCTATCATCAATGACATGAGA
GATCTTCCAAATACATACCCTTTCCACACTCCAGTCAATGCAAAGGTTGTAAAGGACTACTACAAAATCATCACTCGGCC
AATGGACCTACAAACACTCCGCGAAAACGTGCGTAAACGCCTCTACCCATCTCGGGAAGAGTTCAGAGAGCATCTGGAGC
TAATTGTGAAAAATAGTGCAACCTACAATGGGCCAAAACACTCATTGACTCAGATCTCTCAATCCATGCTGGATCTCTGT
GATGAAAAACTCAAAGAGAAAGAAGACAAATTAGCTCGCTTAGAGAAAGCTATCAACCCCTTGCTAGATGATGATGACCA
AGTGGCGTTTTCTTTCATTCTGGACAACATTGTCACCCAGAAAATGATGGCAGTTCCAGATTCTTGGCCATTTCATCACC
CAGTTAATAAGAAATTTGTTCCAGATTATTACAAAGTGATTGTCAATCCAATGGATTTAGAGACCATACGTAAGAACATC
TCCAAGCACAAGTATCAGAGTCGGGAGAGCTTTCTAGATGATGTAAACCTTATTCTGGCCAACAGTGTTAAGTATAATGG
ACCTGAGAGTCAGTATACTAAGACTGCCCAGGAGATTGTGAACGTCTGTTACCAGACATTGACTGAGTATGATGAACATT
TGACTCAACTTGAGAAGGATATTTGTACAGCTAAAGAAGCAGCTTTGGAGGAAGCAGAATTAGAAAGCCTGGACCCAATG
ACCCCAGGGCCCTACACGCCTCAGCCTCCTGATTTGTATGATACCAACACATCCCTCAGTATGTCTCGAGATGCCTCTGT
ATTTCAAGATGAGAGCAATATGTCTGTCTTGGATATTCCCACTGCCACTCCAGAAAAGCAGGTAACACAGGAAGGTGAAG
ATGGAGATGGTGATCTTGCAGATGAAGAGGAAGGAACTGTACAACAGCCTCAAGCCAGTGTCCTGTATGAGGATTTGCTT
ATGTCTGAAGGAGAAGATGATGAGGAAGATGCTGGGAGTGATGAAGAAGGAGACAATCCTTTCTCTGCTATCCAGCTGAG
TGAAAGTGGAAGTGACTCTGATGTAGGATCTGGTGGAATAAGACCCAAACAACCCCGCATGCTTCAGGAGAACACAAGGA
TGGACATGGAAAATGAAGAAAGCATGATGTCCTATGAGGGAGACGGTGGGGAGGCTTCCCATGGTTTGGAGGATAGCAAC
ATCAGTTATGGGAGCTATGAGGAGCCTGATCCCAAGTCGAACACCCAAGACACAAGCTTCAGCAGCATCGGTGGGTATGA
GGTATCAGAGGAGGAAGAAGATGAGGAGGAGGAAGAGCAGCGCTCTGGGCCGAGCGTACTAAGCCAGGTCCACCTGTCAG
AGGACGAGGAGGACAGTGAGGATTTCCACTCCATTGCTGGGGACAGTGACTTGGACTCTGATGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 28 .47 RPM |
| SRP007412_cerebellum | 37 .82 RPM |
| SRP007412_heart | 15 .74 RPM |
| SRP007412_kidney | 23 .34 RPM |
| SRP007412_liver | 20 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000147133 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009092 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005663 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005804 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_161 | 95.39 | 90.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000020453 retrocopies