Parental gene:

ATP1B1, ENSPTRG00000001653

Aliases:None
Description:Pan troglodytes ATPase, Na+/K+ transporting, beta 1 polypeptide (ATP1B1), mRNA. [Source:RefSeq mRNA;Acc:NM_001098555]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:147497239..147524800(+)


>ENSPTRG00000001653
ATGGCCCGCGGGAAAGCCAAGGAGGAGGGCAGTTGGAAGAAATTCATCTGGAACTCAGAGAAGAAGGAGTTTCTGGGCAG
GACCGGTGGCAGTTGGTTTAAGATCCTTCTATTCTACGTAATATTTTATGGCTGCCTGGCTGGCATCTTCATCGGAACCA
TCCAAGTGATGCTGCTCACCATCAGTGAATTTAAGCCCACATATCAGGACCGAGTGGCCCCGCCAGGATTAACACAGATT
CCTCAGATCCAGAAGACTGAAATTTCCTTTCGTCCTAATGATCCCAAGAGCTATGAGGCATATGTGCTGAACATAGTTAG
GTTCCTGGAAAAGTACAAAGATTCAGCCCAGAGGGATGACATGATTTTTGAAGATTGTGGTGATGTGCCCAGTGAACCGA
AAGAACGAGGAGACTTTAATCATGAACGAGGAGAGCGAAAGGTCTGCAGATTCAAGCTTGAATGGCTGGGAAATTGCTCT
GGATTAAATGATGAAACTTATGGCTACAAAGAGGGCAAACCATGCATTATTATAAAGCTCAACCGAGTGCTAGGCTTCAA
ACCTAAGCCTCCCAAGAATGAGTCCTTGGAGACTTACCCAGTGATGAAGTATAACCCAAATGTCCTTCCCGTTCAGTGCA
CTGGCAAGCGAGATGAAGATAAGGATAAAATTGGAAATGTGGAGTATTTTGGACTGGGCAACTCCCCTGGTTTTCCTCTG
CAGTATTATCCCTACTATGGCAAACTCCTGCAGCCCAAATACCTGCAACCCCTGCTGGCCGTACAGTTCACCAATCTTAC
CATGGACACTGAAATTCGCATAGAGTGTAAGGCGTACGGTGAGAACATTGGGTACAGTGAGAAAGACCGTTTTCAGGGAC
GTTTTGATGTAAAAATTGAAGTTAAGAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 668 .72 RPM
SRP007412_cerebellum 415 .27 RPM
SRP007412_heart 278 .43 RPM
SRP007412_kidney 1121 .13 RPM
SRP007412_liver 87 .96 RPM
SRP007412_testis 60 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010317 ortholog_one2one 1 retrogene
retro_cjac_2288,
Homo sapiens ENSG00000143153 ortholog_one2one 1 retrogene
retro_hsap_2924,
Gorilla gorilla ENSGGOG00000002499 ortholog_one2one 1 retrogene
retro_ggor_2027,
Pan troglodytes ENSPTRG00000015476 within_species_paralog 2 retrogenes
retro_ptro_1603, retro_ptro_951,
Xiphophorus maculatus ENSXMAG00000016407 ortholog_one2many 1 retrogene
retro_xmac_22,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1979 83.42 65.68
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Download FASTA sequences of all ENSPTRG00000001653 retrocopies