Parental gene: | LARP4, ENSPTRG00000004935 |
| Aliases: | None |
| Description: | La ribonucleoprotein domain family, member 4 [Source:UniProtKB/TrEMBL;Acc:K7ANC5] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 12:38850865..38931997(-) |
>ENSPTRG00000004935
ATGTTGCTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTGCTCC
TGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACATCAGGTGCTCATC
CTGAGGTGTCTGTCTTTAATACAGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATATGAAGTAATGTATTCTTCA
TCTTGTGAAACCACAAGAAATAGTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCTGAGTTA
CCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGAAACAATTAG
AATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATT
TGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCC
CATGGTACAAGTTGATGAGAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTG
AAACAACACCAATAGAGGAAGTGAAAGCTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACAC
AATAGCAACTGGTATATCACTTTCCAGTCAGACACAGATGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAAC
ATTTCAGGGCAAGCCAATTATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATT
CTAGTATCTATAGTCACCCCATTCAAACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCAC
CAACAGTACTCGGTCTATAGTATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGGCTCC
CTTTCCCAATGGTAGTTTTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATGAATATGGGTC
GACCATTCCAAAAAAATCGTGTGAAGCCTCAGTTTAGGTCATCCGGTGGTTCAGAACACTCAACAGAGGGCTCTGTATCC
TTGGGGGATGGACAGTTGAACAGATCTAGTTCAAGAAATTTTCCAACTGAACGGCATAACCCCACAGTAACTGGGCATCA
GGAGCAAACTTACCTTCAGAAGGAGACTTCCACTTTGCAGGTGGAACAGAATGGGGACTATGGTAGGGGCAGGAGAACTC
TCTTCAGAGGTCGAAGACGACGAGAAGATGACAGGATCTCAAGACCTCATCCTTCAACAGCTGAATCAAAGGCTCCAACA
CCAAAGTTTGACTTATTAGCCTCAAATTTTCCACCTTTACCTGGAAGTTCATCAAGAATGCCAGGTGAACTCGTTTTGGA
GAATAGGATGTCTGATGTTGTTAAAGGTGTCTACAAAGAAAAGGATAATGAAGAGTTGACAATTAGTTGCCCAGTGCCTG
CAGATGAGCAGACAGAATGCACTTCTGCCCAGCAACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTACTGCA
TTAAGCACAACTCAGCAAGAAAAGGATCTAATACAAGATTCCTCTGTTCAGAAGGATGGTCTCAATCAGACAACTATACC
AGTTTCTCCTCCAAGTACTACAAAGCCATCGAGGGCAAGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAG
CTGTGGCTCTACAGGAACCCCGAAAGTTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTT
GTGCAGCCACTACGGGAACTTCGCTCCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCCGT
TGAGAAACCACATGAGAAGCCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATACAATCCCCAGGGGAG
CAGCAGGAAAAATCAGGGAACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAA
GAGCAATATGTGCCACCCAGATCACCAAAGTAA
ATGTTGCTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTGCTCC
TGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACATCAGGTGCTCATC
CTGAGGTGTCTGTCTTTAATACAGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATATGAAGTAATGTATTCTTCA
TCTTGTGAAACCACAAGAAATAGTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCTGAGTTA
CCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGAAACAATTAG
AATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATT
TGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCC
CATGGTACAAGTTGATGAGAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTG
AAACAACACCAATAGAGGAAGTGAAAGCTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACAC
AATAGCAACTGGTATATCACTTTCCAGTCAGACACAGATGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAAC
ATTTCAGGGCAAGCCAATTATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATT
CTAGTATCTATAGTCACCCCATTCAAACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCAC
CAACAGTACTCGGTCTATAGTATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGGCTCC
CTTTCCCAATGGTAGTTTTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATGAATATGGGTC
GACCATTCCAAAAAAATCGTGTGAAGCCTCAGTTTAGGTCATCCGGTGGTTCAGAACACTCAACAGAGGGCTCTGTATCC
TTGGGGGATGGACAGTTGAACAGATCTAGTTCAAGAAATTTTCCAACTGAACGGCATAACCCCACAGTAACTGGGCATCA
GGAGCAAACTTACCTTCAGAAGGAGACTTCCACTTTGCAGGTGGAACAGAATGGGGACTATGGTAGGGGCAGGAGAACTC
TCTTCAGAGGTCGAAGACGACGAGAAGATGACAGGATCTCAAGACCTCATCCTTCAACAGCTGAATCAAAGGCTCCAACA
CCAAAGTTTGACTTATTAGCCTCAAATTTTCCACCTTTACCTGGAAGTTCATCAAGAATGCCAGGTGAACTCGTTTTGGA
GAATAGGATGTCTGATGTTGTTAAAGGTGTCTACAAAGAAAAGGATAATGAAGAGTTGACAATTAGTTGCCCAGTGCCTG
CAGATGAGCAGACAGAATGCACTTCTGCCCAGCAACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTACTGCA
TTAAGCACAACTCAGCAAGAAAAGGATCTAATACAAGATTCCTCTGTTCAGAAGGATGGTCTCAATCAGACAACTATACC
AGTTTCTCCTCCAAGTACTACAAAGCCATCGAGGGCAAGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAG
CTGTGGCTCTACAGGAACCCCGAAAGTTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTT
GTGCAGCCACTACGGGAACTTCGCTCCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCCGT
TGAGAAACCACATGAGAAGCCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATACAATCCCCAGGGGAG
CAGCAGGAAAAATCAGGGAACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAA
GAGCAATATGTGCCACCCAGATCACCAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .55 RPM |
| SRP007412_cerebellum | 19 .25 RPM |
| SRP007412_heart | 53 .37 RPM |
| SRP007412_kidney | 56 .80 RPM |
| SRP007412_liver | 42 .00 RPM |
| SRP007412_testis | 38 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000161813 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012513 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008172 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023025 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017798 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000049091 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1003 | 86.54 | 91.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000004935 retrocopies