Parental gene: | Larp4, ENSRNOG00000049091 |
| Aliases: | None |
| Description: | La ribonucleoprotein domain family, member 4 [Source:MGI Symbol;Acc:MGI:2443114] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | X:116149229..116180301(+) |
>ENSRNOG00000049091
GAAATGTGTTTTGTAGAGGTGACATCTAAAGGCACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTCCTTCTGG
AAATCCAGATGGCACTCCTGTAACTGAAACATCTTGGCATGAAACTGCAGCCACATCTGGATCTCACCCCGAGGGCAATA
CAGAACTTTCAGAGGAAATGTGTAAGGAATATGAAGTGATGTATTCTCCATCTTGTGAACCCACAAGAAATACCGCAGAC
ATTGAAGAATCAGCTGATGGAATGATCTTAGGACCTGAAGACCTGAGTTACCAACTATACGATGTTTCTGGTAACCTTTG
TTCTATTATTACTAAAAGTGATTTTAGCAAGACCATAAAAAGACAGACTGATTACTGCTTTTTTCTGCAAGAAAACTTAT
CAAAGGACCTGTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATATGGACAGTTGCCAACATGGAAGAAATA
AAAAAATTGACTACTGATCCAGACTTAATTCTTGAAGTATTGAGATGTATACAGATATTTCCTAAATTTGATAATGAACT
TGTCCCTCCCTCCATCCCTACCAACTGTTCTCTTCATTTTCCCTCCACCAGGCCTGTAAGAGAAGTGAAAGCTTTGTTTA
AAAATGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAACAGCAACTGGTATATCACTTTCCAGTCAGACACA
GATGCACAGCAGGCTTTTAAATACTTACGAGAAGAAGTTAAAACGTTTCAGGGCAAGCCAATCATGTTTGTTGTCAGATT
TCACGAAATTTGCCTTCCTACTTCTTCCCATCGTTATTCATGGTTTAGATTTGAGCAGATGGTGCAGCCTCATAACCACT
GTGATCTCCTGACTCCTCCTTCCTTGTCTCTCACTGCGCATCCTTGCAGTGTAGCACTGCACACACACAAACTAGTTCTT
ATGAGCAAAGGCATGACTTCTTCCGTATCTTTTTATGAACCAAATAAAGTGGATAGCAGGGGTTTTTTTGTATTTATCTT
TAAAAATAAAGGGTCATACAAGAATAATAAAAATTATGAACAAACCAGACCTTTTATAAAGATTAGTGTGAAGCCTCATT
TTAGGTCATCTAGTGGTTCAGAACACTCAACAGATGGATCTGTGTCATTGGGGGATGGACCGGTGAGCAGATCCAGTTCA
AGGATCTTTCTTTCTGAACGGCATAACCCAACAGTAACAGGGCATCAGGAACAGACTTATCTTCCAAAGGATGCTCCCAT
TTTACAGATGGAACAGAATGGGGACTTTGGAAGAGGCAGGAGAACTCTCTTTAGAGGTCGAAGACGAAGAGAAGATGACA
GGATCCCAAGACCCCAGCCTGCAGCAACTGAAGCAAAGGCTCCAGCACCAAAGTTTGACTTACTTGCTACAAATTTCCCT
CCTCTACCCGGAAGCTCATCAAGAATGCCAGATGAACTCGCTTTGGAGAACAGAATGTCTGATGTTGTTAAAGGTGTCTG
CAAAGAAAAGGACAATGAGGACTTGAGAGTTAGTTGCCCGGTGCCTGCAGAAGACGGACAGACAGACTGCGCTTCTGTGC
CACAACTCAGCATAAGTCCTAGTCCTCCATGTACAGCTGAGCCTCCTGCATTAAGCACAACTCAGCAGGAGAAGGATCAA
ATGGAGGATTCCGCTGCTCCAAAAGATGTTCTCAATCCAGTGCCAGTGCCAGTGTCTTCTCCAACTACTACAAAGCCATC
AAGGGCAAACACTGCTTCACCTTGCAATAGTACCGTAAATACACCTATAGCTGTGGCCCCACAGGAACCTCGAAAGTTAA
GCTATGCTGAAGTGTGCCAGAAGCCTCCTAAGGAGCCGTCTCCGGTTCTTGTCCAGCCACTGAGGGAGCTTCGGTCCAAT
GTAGTGTCTCCCACCAGAAACGAAGAGAACGGAGCTCCTGAGAAGCCTGTTGAGAAGCCACAGGAGAAACCGGAAACAAG
GGCTAGTAAGGATCATTCTGGCTTCCGAGGCAACACCATTCCCCGGGGAGCAGCTGGAAAAATCAGGGAACAGAGACGCC
AGTTCAGCCATAGGGCTGCACCTCAGGGAGTGACTCGACAGAATGGGAAGGAGCAAATTGTGAGTAGGAAGAGCCCAAAA
GAAATGTGTTTTGTAGAGGTGACATCTAAAGGCACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTCCTTCTGG
AAATCCAGATGGCACTCCTGTAACTGAAACATCTTGGCATGAAACTGCAGCCACATCTGGATCTCACCCCGAGGGCAATA
CAGAACTTTCAGAGGAAATGTGTAAGGAATATGAAGTGATGTATTCTCCATCTTGTGAACCCACAAGAAATACCGCAGAC
ATTGAAGAATCAGCTGATGGAATGATCTTAGGACCTGAAGACCTGAGTTACCAACTATACGATGTTTCTGGTAACCTTTG
TTCTATTATTACTAAAAGTGATTTTAGCAAGACCATAAAAAGACAGACTGATTACTGCTTTTTTCTGCAAGAAAACTTAT
CAAAGGACCTGTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATATGGACAGTTGCCAACATGGAAGAAATA
AAAAAATTGACTACTGATCCAGACTTAATTCTTGAAGTATTGAGATGTATACAGATATTTCCTAAATTTGATAATGAACT
TGTCCCTCCCTCCATCCCTACCAACTGTTCTCTTCATTTTCCCTCCACCAGGCCTGTAAGAGAAGTGAAAGCTTTGTTTA
AAAATGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAACAGCAACTGGTATATCACTTTCCAGTCAGACACA
GATGCACAGCAGGCTTTTAAATACTTACGAGAAGAAGTTAAAACGTTTCAGGGCAAGCCAATCATGTTTGTTGTCAGATT
TCACGAAATTTGCCTTCCTACTTCTTCCCATCGTTATTCATGGTTTAGATTTGAGCAGATGGTGCAGCCTCATAACCACT
GTGATCTCCTGACTCCTCCTTCCTTGTCTCTCACTGCGCATCCTTGCAGTGTAGCACTGCACACACACAAACTAGTTCTT
ATGAGCAAAGGCATGACTTCTTCCGTATCTTTTTATGAACCAAATAAAGTGGATAGCAGGGGTTTTTTTGTATTTATCTT
TAAAAATAAAGGGTCATACAAGAATAATAAAAATTATGAACAAACCAGACCTTTTATAAAGATTAGTGTGAAGCCTCATT
TTAGGTCATCTAGTGGTTCAGAACACTCAACAGATGGATCTGTGTCATTGGGGGATGGACCGGTGAGCAGATCCAGTTCA
AGGATCTTTCTTTCTGAACGGCATAACCCAACAGTAACAGGGCATCAGGAACAGACTTATCTTCCAAAGGATGCTCCCAT
TTTACAGATGGAACAGAATGGGGACTTTGGAAGAGGCAGGAGAACTCTCTTTAGAGGTCGAAGACGAAGAGAAGATGACA
GGATCCCAAGACCCCAGCCTGCAGCAACTGAAGCAAAGGCTCCAGCACCAAAGTTTGACTTACTTGCTACAAATTTCCCT
CCTCTACCCGGAAGCTCATCAAGAATGCCAGATGAACTCGCTTTGGAGAACAGAATGTCTGATGTTGTTAAAGGTGTCTG
CAAAGAAAAGGACAATGAGGACTTGAGAGTTAGTTGCCCGGTGCCTGCAGAAGACGGACAGACAGACTGCGCTTCTGTGC
CACAACTCAGCATAAGTCCTAGTCCTCCATGTACAGCTGAGCCTCCTGCATTAAGCACAACTCAGCAGGAGAAGGATCAA
ATGGAGGATTCCGCTGCTCCAAAAGATGTTCTCAATCCAGTGCCAGTGCCAGTGTCTTCTCCAACTACTACAAAGCCATC
AAGGGCAAACACTGCTTCACCTTGCAATAGTACCGTAAATACACCTATAGCTGTGGCCCCACAGGAACCTCGAAAGTTAA
GCTATGCTGAAGTGTGCCAGAAGCCTCCTAAGGAGCCGTCTCCGGTTCTTGTCCAGCCACTGAGGGAGCTTCGGTCCAAT
GTAGTGTCTCCCACCAGAAACGAAGAGAACGGAGCTCCTGAGAAGCCTGTTGAGAAGCCACAGGAGAAACCGGAAACAAG
GGCTAGTAAGGATCATTCTGGCTTCCGAGGCAACACCATTCCCCGGGGAGCAGCTGGAAAAATCAGGGAACAGAGACGCC
AGTTCAGCCATAGGGCTGCACCTCAGGGAGTGACTCGACAGAATGGGAAGGAGCAAATTGTGAGTAGGAAGAGCCCAAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .31 RPM |
| SRP017611_kidney | 19 .61 RPM |
| SRP017611_brain | 7 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000161813 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012513 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008172 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023025 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017798 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004935 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_644 | 88.83 | 52.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000049091 retrocopies