Parental gene:

PAFAH1B1, ENSPTRG00000008551

Aliases:None
Description:Pan troglodytes platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) (PAFAH1B1), mRNA. [Source:RefSeq mRNA;Acc:NM_001034091]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:2588231..2636305(+)


>ENSPTRG00000008551
ATGGTGCTGTCCCAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGC
ATATTCAGTTTTTAAAAAGGAAGCTGAATTAGATATGAATGAAGAATTAGATAAAAAGTATGCTGGTCTTTTGGAAAAAA
AATGGACATCTGTTATTAGATTACAAAAGAAGGTTATGGAATTAGAATCAAAGCTAAATGAAGCAAAAGAAGAATTTACG
TCAGGTGGACCTCTTGGTCAGAAACGAGACCCAAAAGAATGGATTCCCCGTCCGCCAGAAAAATATGCATTGAGTGGTCA
CAGGAGTCCAGTCACTCGAGTCATTTTCCATCCTGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGG
TGTGGGATTATGAGACTGGAGATTTTGAACGAACTCTTAAAGGACATACAGACTCTGTACAGGACATTTCATTCGACCAC
AGCGGCAAGCTTCTGGCTTCCTGTTCTGCAGATATGACCATTAAACTATGGGATTTTCAGGGCTTTGAATGCATCAGAAC
CATGCACGGCCATGACCACAATGTTTCTTCAGTAGCCATCATGCCCAATGGAGATCATATAGTGTCTGCCTCAAGGGATA
AAACTATAAAAATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACATTCACAGGACACAGAGAATGGGTACGTATGGTA
CGACCAAATCAAGATGGCACTCTGATAGCCAGCTGTTCCAATGACCAGACTGTGCGTGTATGGGTCGTAGCAACAAAGGA
ATGCAAGGCTGAGCTCCGAGAGCATGAGCATGTGGTAGAATGCATTTCCTGGGCTCCAGAAAGCTCATATTCCTCCATCT
CTGAAGCAACAGGATCTGAGACTAAAAAAAGTGGTAAACCTGGGCCATTCTTGCTGTCTGGATCCAGAGACAAGACTATT
AAGATGTGGGATGTCAGTACTGGCATGTGCCTTATGACCCTCGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCA
TTCTGGGGGGAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTACGTGTATGGGATTACAAGAACAAGCGATGCATGA
AGACCCTCAATGCGCATGAACACTTTGTTACCTCCTTGGATTTCCACAAGACGGCACCCTATGTCGTCACTGGCAGCGTA
GATCAAACAGTAAAAGTGTGGGAGTGCCGTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 341 .10 RPM
SRP007412_cerebellum 307 .65 RPM
SRP007412_heart 120 .81 RPM
SRP007412_kidney 124 .82 RPM
SRP007412_liver 55 .62 RPM
SRP007412_testis 287 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000007168 ortholog_one2one 2 retrogenes
retro_hsap_2144, retro_hsap_2292,
Monodelphis domestica ENSMODG00000010776 ortholog_one2one 2 retrogenes
retro_mdom_441, retro_mdom_460,
Mus musculus ENSMUSG00000020745 ortholog_one2one 1 retrogene
retro_mmus_2988,
Pongo abelii ENSPPYG00000007796 ortholog_one2one 1 retrogene
retro_pabe_1932,
Pan troglodytes ENSPTRG00000020853 within_species_paralog 1 retrogene
retro_ptro_344,
Pan troglodytes ENSPTRG00000023653 other_paralog 2 retrogenes
retro_ptro_18, retro_ptro_1975,
Sorex araneus ENSSARG00000002826 ortholog_one2one 4 retrogenes
retro_sara_266, retro_sara_275, retro_sara_364, retro_sara_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1569 90.50 53.66
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000008551 retrocopies