Parental gene: | GPCPD1, ENSPTRG00000013228 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 20:5402874..5471482(-) |
>ENSPTRG00000013228
ATGACACCTTCTCAGGTTGCCTTTGAAATAAGAGGAACTCTTTTACCAGGAGAAGTTTTTGCAATATGTGGAAGCTGTGA
TGCTTTGGGAAACTGGAATCCTCAAAATGCTGTGGCTCTTCTTCCAGAGAATGACACAGGTGAAAGCATGTTATGGAAAG
CAACCATTGTACTCAGTAGAGGAGCATCAGTTCAGTATCGCTACTTCAAAGGGTACTTTTTAGAACCGAAGACTATCGGT
GGTCCATGTCAAGTGATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGCGAAATTAT
TATTGACGATGGACAATTTGGAATCCACAATGGTGTTGAAACTCTGGATTCTGGATGGCTGACATGTCAGACTGAAATAA
GATTACGTTTGCATTATTCTGAAAAACCTCCTGTGTCAATAACCAAGAAAAAATTAAAAAAATCTAGATTTAGGGTGAAG
CTGACACTAGAAGGCCTGGAAGAAGATGATGATGATAGGGTATCTCCCACTGTACTCCACAAAATGTCCAATAGCTTGGA
GATATCCTTAATAAGCGACAATGAGTTCAAGTGCAGGCATTCACAGCCGGAGTGTGGTTATGGCTTGCAGCCTGATCGTT
GGACAGAGTACAGCATACAGACGATGGAACCAGATAACCTGGAACTAATCTTTGATTTTTTTGAAGAAGATCTCAGTGAG
CACGTAGTTCAGGGTGATGCCCTTCCTGGACATGTGGGTACAGCTTGTCTCTTATCATCCACCATTGCTGAGAGTGGAAA
GAGTGCTGGAATTCTTACTCTTCCCATCATGAGCAGAAATTCCCGGAAAACAATAGGCAAAGTGAGAGTTGACTATATAA
TTATTAAGCCATTACCAGGATACAGTTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAGCCAAGAATACCATTGGAT
GTTGGCCATCGAGGTGCAGGAAACTCTACAACAACTGCCCAGCTGGCTAAAGTTCAAGAAAATACTATTGCTTCTTTAAG
AAATGCTGCTAGTCATGGTGCAGCCTTTGTAGAATTTGACGTACACCTTTCAAAGGACTTTGTGCCCGTGGTATATCATG
ATCTTACCTGTTGTTTGACTATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAAGAATTA
ACATTTGACCAACTCCAGTTGTTAAAGCTCACTCATGTGACTGCACTGAAATCTAAGGATCGGAAAGAATCTGTGGTCCA
GGAGGAAAATTCCTTTTCAGAAAATCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAGTCTTTGCCAGAAGATGTAGGGT
TTAACATTGAAATAAAATGGATCTGCCAACAAAGGGATGGAATGTGGGATGGTAACTTATCAACATATTTTGACATGAAT
CTGTTTTTGGATATAATTTTAAAAACTGTTTTAGAAAATTCTGGGAAGAGGAGAATAGTGTTTTCTTCATTTGATGCAGA
TATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCCATACTATTTTTAACTCAAGGAAAATCTGAGATTTATCCTG
AACTCATGGACCTCAGATCTCGGACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTACTGGGGATAAATGTA
CATACTGAAGACTTGCTCAGAAACCCATCCTATATTCAAGAGGCAAAAGCTAAGGGACTAGTCATATTCTGCTGGGGTGA
TGATACCAATGATCCTGAAAACAGAAGGAAATTGAAGGAACTTGGAGTTAATGGTCTAATTTATGATAGGATATATGATT
GGATGCCCGAACAACCAAATATATTCCAAGTGGAGCAATTGGAACGCCTGAAGCAGGAATTGCCAGAGCTTAAGAGCTGT
TTGTGTCCCACTGTTAGCCGCTTTGTTCCCTCATCTTTGTGTGGGGAGTCTGATATCCATGTGGATGCCAACGGCATTGA
TAACGTGGAGAATGCTTAG
ATGACACCTTCTCAGGTTGCCTTTGAAATAAGAGGAACTCTTTTACCAGGAGAAGTTTTTGCAATATGTGGAAGCTGTGA
TGCTTTGGGAAACTGGAATCCTCAAAATGCTGTGGCTCTTCTTCCAGAGAATGACACAGGTGAAAGCATGTTATGGAAAG
CAACCATTGTACTCAGTAGAGGAGCATCAGTTCAGTATCGCTACTTCAAAGGGTACTTTTTAGAACCGAAGACTATCGGT
GGTCCATGTCAAGTGATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGCGAAATTAT
TATTGACGATGGACAATTTGGAATCCACAATGGTGTTGAAACTCTGGATTCTGGATGGCTGACATGTCAGACTGAAATAA
GATTACGTTTGCATTATTCTGAAAAACCTCCTGTGTCAATAACCAAGAAAAAATTAAAAAAATCTAGATTTAGGGTGAAG
CTGACACTAGAAGGCCTGGAAGAAGATGATGATGATAGGGTATCTCCCACTGTACTCCACAAAATGTCCAATAGCTTGGA
GATATCCTTAATAAGCGACAATGAGTTCAAGTGCAGGCATTCACAGCCGGAGTGTGGTTATGGCTTGCAGCCTGATCGTT
GGACAGAGTACAGCATACAGACGATGGAACCAGATAACCTGGAACTAATCTTTGATTTTTTTGAAGAAGATCTCAGTGAG
CACGTAGTTCAGGGTGATGCCCTTCCTGGACATGTGGGTACAGCTTGTCTCTTATCATCCACCATTGCTGAGAGTGGAAA
GAGTGCTGGAATTCTTACTCTTCCCATCATGAGCAGAAATTCCCGGAAAACAATAGGCAAAGTGAGAGTTGACTATATAA
TTATTAAGCCATTACCAGGATACAGTTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAGCCAAGAATACCATTGGAT
GTTGGCCATCGAGGTGCAGGAAACTCTACAACAACTGCCCAGCTGGCTAAAGTTCAAGAAAATACTATTGCTTCTTTAAG
AAATGCTGCTAGTCATGGTGCAGCCTTTGTAGAATTTGACGTACACCTTTCAAAGGACTTTGTGCCCGTGGTATATCATG
ATCTTACCTGTTGTTTGACTATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAAGAATTA
ACATTTGACCAACTCCAGTTGTTAAAGCTCACTCATGTGACTGCACTGAAATCTAAGGATCGGAAAGAATCTGTGGTCCA
GGAGGAAAATTCCTTTTCAGAAAATCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAGTCTTTGCCAGAAGATGTAGGGT
TTAACATTGAAATAAAATGGATCTGCCAACAAAGGGATGGAATGTGGGATGGTAACTTATCAACATATTTTGACATGAAT
CTGTTTTTGGATATAATTTTAAAAACTGTTTTAGAAAATTCTGGGAAGAGGAGAATAGTGTTTTCTTCATTTGATGCAGA
TATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCCATACTATTTTTAACTCAAGGAAAATCTGAGATTTATCCTG
AACTCATGGACCTCAGATCTCGGACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTACTGGGGATAAATGTA
CATACTGAAGACTTGCTCAGAAACCCATCCTATATTCAAGAGGCAAAAGCTAAGGGACTAGTCATATTCTGCTGGGGTGA
TGATACCAATGATCCTGAAAACAGAAGGAAATTGAAGGAACTTGGAGTTAATGGTCTAATTTATGATAGGATATATGATT
GGATGCCCGAACAACCAAATATATTCCAAGTGGAGCAATTGGAACGCCTGAAGCAGGAATTGCCAGAGCTTAAGAGCTGT
TTGTGTCCCACTGTTAGCCGCTTTGTTCCCTCATCTTTGTGTGGGGAGTCTGATATCCATGTGGATGCCAACGGCATTGA
TAACGTGGAGAATGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 82 .94 RPM |
| SRP007412_cerebellum | 141 .35 RPM |
| SRP007412_heart | 26 .90 RPM |
| SRP007412_kidney | 23 .35 RPM |
| SRP007412_liver | 10 .93 RPM |
| SRP007412_testis | 44 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000125772 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010687 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006827 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2625 | 90.64 | 75.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000013228 retrocopies