Parental gene:

GABPA, ENSPTRG00000013810

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:21:11923712..11961472(+)


>ENSPTRG00000013810
ATGACTAAAAGAGAAGCAGAGGAGCTGATAGAAATTGAGATTGATGGAACAGAGAAAGCAGAGTGCACAGAAGAAAGCAT
TGTAGAACAAACCTACGCGCCAGCTGAATGTGTAAGCCAGGCCATAGACATCAATGAACCAATAGGCAATTTAAAGAAAC
TGCTAGAACCAAGACTACAGTGTTCTTTGGATGCTCATGAAATTTGTCTGCAAGATATCCAGCTGGATCCAGAACGAAGT
TTATTTGACCAAGGAGTAAAAACAGATGGAACTGTACAGCTTAGTGTACAGGTAATTTCTTACCAAGGAATTGAACCAAA
GTTAAACATCCTTGAAATTGTTAAACCTGCGGACACTGTTGAGGTTGTTATTGATCCAGATGCCCACCATGCTGAATCAG
AAGCACATCTTGTTGAAGAAGCTCAAGTGATAACTCTTGATGGCACAAAACACATCACAACCATTTCAGATGAAACTTCA
GAACAAGTGACAAGATGGGCTGCTGCACTGGAAGGCTATAGGAAAGAACAAGAACGCCTTGGGATACCCTATGATCCCAT
ACAGTGGTCCACAGACCAAGTCCTGCATTGGGTGGTTTGGGTAATGAAGGAATTCAGCATGACCGATATAGACCTCACCA
CACTCAACATTTCGGGGAGAGAATTATGTAGTCTCAACCAAGAAGATTTTTTTCAGCGGGTTCCTCGGGGAGAAATTCTC
TGGAGTCATCTGGAACTTCTCCGAAAATATGTATTGGCAAGTCAAGAACAACAGATGAATGAAATAGTTACAATTGATCA
ACCTGTGCAAATTATTCCAGCATCAGTGCAATCTGCTACACCTACTACCATTAAAGTTATAAATAGTAGTGCGAAGGCAG
CCAAAGTACAAAGAGCGCCGAGGATTTCAGGAGAAGATAGAAGCTCACCTGGGAACAGAACAGGAAACAATGGCCAAATC
CAACTATGGCAGTTTTTGCTAGAACTTCTTACTGATAAGGACGCTCGAGACTGCATTTCTTGGGTTGGTGATGAAGGTGA
ATTTAAGCTAAATCAGCCTGAACTGGTTGCACAGAAATGGGGACAGCGTAAAAATAAGCCTACGATGAACTATGAGAAAC
TCAGTCGTGCATTAAGATATTATTACGATGGGGACATGATTTGTAAAGTTCAAGGCAAGAGATTTGTGTACAAGTTTGTC
TGTGACTTGAAGACTCTTATTGGATACAGTGCAGCGGAGTTGAACCGTTTGGTCACAGAATGTGAACAGAAGAAACTTGC
AAAGATGCAGCTCCATGGAATTGCCCAGCCAGTCACAGCAGTAGCTCTGGCTACTGCTTCTCTGCAAACGGAAAAGGATA
ATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .87 RPM
SRP007412_cerebellum 14 .84 RPM
SRP007412_heart 16 .09 RPM
SRP007412_kidney 17 .34 RPM
SRP007412_liver 10 .61 RPM
SRP007412_testis 35 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013817 ortholog_one2one 1 retrogene
retro_cjac_2487,
Dasypus novemcinctus ENSDNOG00000016059 ortholog_one2one 1 retrogene
retro_dnov_476,
Homo sapiens ENSG00000154727 ortholog_one2one 1 retrogene
retro_hsap_3737,
Ochotona princeps ENSOPRG00000009283 ortholog_one2one 1 retrogene
retro_opri_1174,
Tursiops truncatus ENSTTRG00000004785 ortholog_one2one 1 retrogene
retro_ttru_154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2536 97.80 100.00
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Download FASTA sequences of all ENSPTRG00000013810 retrocopies