Parental gene:

CDK7, ENSPTRG00000016946

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:45952365..45996035(-)


>ENSPTRG00000016946
ATGGCTCTGGACGTGAAGTCTCGGGCAAAGCGTTATGAGAAGCTGGACTTCCTTGGGGAGGGACAGTTTGCCACCGTTTA
CAAGGCCAGAGATAAGAATACCAACCAAATTGTCGCCATTAAGAAAATCAAACTTGGACATAGATCAGAAGCTAAAGATG
GTATAAATAGAACCGCCTTAAGAGAGATAAAATTATTACAGGAGCTAAGTCATCCAAATATAATTGGTCTCCTTGATGCT
TTTGGACATAAATCTAATATTAGCCTTGTCTTTGATTTTATGGAAACTGATCTAGAGGTTATAATAAAGGATAATAGTCT
TGTGCTGACACCATCACACATCAAAGCCTACATGTTGATGACTCTTCAAGGATTAGAATATTTACATCAACATTGGATCC
TACATAGGGATCTGAAACCAAACAACTTGTTGCTAGATGAAAATGGAGTTCTAAAACTGGCAGATTTTGGCCTGGCCAAA
TCTTTTGGGAGCCCCAATAGAGCTTATACACATCAGGTTGTAACCAGATGGTATCGGGCCCCTGAGTTACTATTTGGAGC
TAGGATGTATGGTGTAGGTGTGGACATGTGGGCTGTTGGCTGTATATTAGCAGAGTTACTTCTAAGGGTTCCTTTTTTGC
CAGGAGATTCAGACCTTGATCAGCTAACAAGAATATTTGAAACTTTGGGCACACCAACTGAGGAACAGTGGCCGGACATG
TGTAGTCTTCCAGATTATGTGACATTTAAGAGTTTCCCTGGAATCCCGTTGCATCACATCTTCAGTGCAGCAGGAGACGA
CTTACTAGATCTCATACAAGGCTTATTCTTATTTAATCCATGTGCTCGAATTACGGCCACACAGGCACTGAAAATGAAGT
ATTTCAGTAATCGGCCAGGGCCAACACCTGGATGTCAGCTGCCAAGACCAAACTGTCCAGTGGAAACCTTAAAGGAGCAA
TCAAATCCAGCTTTGGCAATAAAAAGGAAAAGAACAGAGGCCTTAGAACAAGGAGGATTGCCCAAGAAACTAATTTTTTA
A

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .47 RPM
SRP007412_cerebellum 11 .18 RPM
SRP007412_heart 5 .95 RPM
SRP007412_kidney 10 .54 RPM
SRP007412_liver 9 .89 RPM
SRP007412_testis 55 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000134058 ortholog_one2one 1 retrogene
retro_hsap_2335,
Gorilla gorilla ENSGGOG00000013349 ortholog_one2one 1 retrogene
retro_ggor_1772,
Mus musculus ENSMUSG00000069089 ortholog_one2one 1 retrogene
retro_mmus_383,
Otolemur garnettii ENSOGAG00000010748 ortholog_one2one 1 retrogene
retro_ogar_986,
Procavia capensis ENSPCAG00000002566 ortholog_one2one 1 retrogene
retro_pcap_318,
Pongo abelii ENSPPYG00000015525 ortholog_one2one 1 retrogene
retro_pabe_2114,
Tupaia belangeri ENSTBEG00000012193 ortholog_one2one 2 retrogenes
retro_tbel_587, retro_tbel_637,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1707 91.39 60.40
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Download FASTA sequences of all ENSPTRG00000016946 retrocopies