Parental gene:

TMEM161B, ENSPTRG00000017064

Aliases:None
Description:transmembrane protein 161B [Source:HGNC Symbol;Acc:28483]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:27172195..27254356(+)


>ENSPTRG00000017064
ATGGGTGTGATAGGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTATTCTCT
TGCTCGATGGCTACTCTGTAATGGCAGTTTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAATTCTTGCAGGGA
AACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCATTAACCATTCCAAAGGAT
ATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAGCATTGCATTACTTTCCAGAATACCAGTGGCT
GGTGGATTTCACAGTGGCTGCTACAGTTGTGTATCTAGTAACTGAAGTCTACTACAATTTTATGAAGCCTACACAGGAAA
TGAATATCAGCTTAGTCTGGTGCCTGCTTGTTTTGTCTTTTGCAATCAAAGTTCTATTTTCATTAACTACACACTATTTT
AAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCACCTTTGGGTTTTTTTTCTTTGTCAAAGCAATGGCAGTGTTGAT
TGTAACAGAAAATTATCTGGAATTTGGACTTGAAACAGGGTTTACAAATTTTTCAGACAGTGCGATGCAGTTTCTTGAAA
AGCAAGGTTTAGAATCTCAGAGTCCTGTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCATTCATTGGG
GCTTTTTTGACATTTCCTGGATTACGACTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACA
AACTTTACTTCATATCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTAAAACCAATCACCAAAGACTACATTA
TGAACCCACCACTGGGTAAAGAAAGTATCCCTTTAATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATAATC
CTGCTGTGTGCTTTGCGGTTGGCCATGATGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGGATCA
GATGAAGAAAGAAGCGGGGCGAATAAGCACGGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTATCTTTGTGTCA
TTGCACTGCAGTATGTGGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACTAGGTAATCATTCCTGG
GGTATTTATCCAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTGTCCAATTCTGTTTACTCTGAATTACCATC
AGCTGAAGGGAAAATGAAGCATAATGCAAGGCAAGGTCCAGCCGTTCCACCCGGCATGCAAGCTTATGGAGCAGCCCCCT
TTGAAGATCTCCAGGTAGACTTCACAGAGATGCCAAAGTGTGGAGGTAACAAGTATTTACTAGTTCTTGTGTGTACTTTC
TCTGGGTGGGTGGAGGCTTATCCAACACGAACTGAGAAAGCTTGTGAAATAACCCATGTGCTTCTTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .88 RPM
SRP007412_cerebellum 10 .68 RPM
SRP007412_heart 2 .54 RPM
SRP007412_kidney 5 .36 RPM
SRP007412_liver 2 .85 RPM
SRP007412_testis 11 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010857 ortholog_one2one 1 retrogene
retro_cjac_2671,
Homo sapiens ENSG00000164180 ortholog_one2one 1 retrogene
retro_hsap_560,
Gorilla gorilla ENSGGOG00000005684 ortholog_one2one 1 retrogene
retro_ggor_506,
Macaca mulatta ENSMMUG00000009319 ortholog_one2many 1 retrogene
retro_mmul_719,
Nomascus leucogenys ENSNLEG00000013645 ortholog_one2one 1 retrogene
retro_nleu_2224,
Rattus norvegicus ENSRNOG00000032414 ortholog_one2one 1 retrogene
retro_rnor_1023,
Ictidomys tridecemlineatus ENSSTOG00000011141 ortholog_one2many 1 retrogene
retro_itri_1420,
Ictidomys tridecemlineatus ENSSTOG00000027831 ortholog_one2many 2 retrogenes
retro_itri_1419, retro_itri_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_419 86.07 86.85
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000017064 retrocopies