Parental gene:

VPS37A, ENSPTRG00000020019

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:13325578..13376610(+)


>ENSPTRG00000020019
ATGAGCTGGCTCTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGCGGCTGGGTCCCCCGGTGGCCTCACCAGCCTCCAGCA
GCAGAAGCAGCGCCTGATCGAGTCCCTCCGGAACTCACACTCCAGTATAGCCGAAATACAGAAAGATGTGGAATACAGAT
TGCCATTCACCATAAACAACCTGACAATTAACATTAATATATTGCTTCCTCCACAGTTTCCTCAGGAAAAACCAGTGATC
AGTGTTTATCCACCAATACGACATCACTTAATGGATAAACAAGGAGTGTATGTTACCTCTCCATTAGTAAACAATTTTAC
AATGCACTCAGATCTTGGAAAAATTATTCAGAGTCTGTTGGATGAGTTTTGGAAGAATCCTCCAGTTTTAGCTCCTACTT
CAACAGCATTTCCTTATCTATACAGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCA
TATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATAC
CACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCCATTACCCATTCCCACAGTGGATGCTTCAATAC
CGACAAGCCAAAATGGTTTTGGTTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTCTCAGAACTAAGTGTGTCA
CAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAAACAAATTATTAC
CGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCATCTTGGAAGCCAAAA
GACAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAA
CTTAGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACACGAAGCTGAGGAAGAATCTGATAA
TATTGCAGAAGACTTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCC
ACTGTAGAAGAGCCAAGGAAGAGAAACTTCAGCAGGCGATAGCAATGCACAGCCAATTTCATGCTCCACTATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .10 RPM
SRP007412_cerebellum 18 .18 RPM
SRP007412_heart 17 .05 RPM
SRP007412_kidney 17 .31 RPM
SRP007412_liver 8 .64 RPM
SRP007412_testis 64 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000682 ortholog_one2one 2 retrogenes
retro_chof_1257, retro_chof_2124,
Callithrix jacchus ENSCJAG00000011769 ortholog_one2one 1 retrogene
retro_cjac_1790,
Dipodomys ordii ENSDORG00000014879 ortholog_one2one 9 retrogenes
retro_dord_257, retro_dord_294, retro_dord_542, retro_dord_544, retro_dord_580, retro_dord_598, retro_dord_631, retro_dord_668, retro_dord_751,
Homo sapiens ENSG00000155975 ortholog_one2one 1 retrogene
retro_hsap_3256,
Gorilla gorilla ENSGGOG00000011650 ortholog_one2one 1 retrogene
retro_ggor_2217,
Nomascus leucogenys ENSNLEG00000002558 ortholog_one2one 1 retrogene
retro_nleu_2687,
Pongo abelii ENSPPYG00000018386 ortholog_one2one 2 retrogenes
retro_pabe_2699, retro_pabe_2821,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2202 89.88 84.13
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Download FASTA sequences of all ENSPTRG00000020019 retrocopies