Parental gene:

CCDC25, ENSPTRG00000020109

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:24036618..24075962(-)


>ENSPTRG00000020109
ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACTATTTACATGGGAAAAGATAAATATGAAAATGA
AGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCATGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGAT
TACATAAGGGAGAGAATATAGAAGACATCCCAAAGGAAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATT
CAAGGCTGCAAGATGAACAACGTTAATGTGGTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGG
GCAGATAGGCTTTCACAGGCAGAAGGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAG
AAAAGACCAAAGTCGAGCGGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAA
GCCCAAATTCAGGAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTC
ATCACTAATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCATGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 37 .93 RPM
SRP007412_cerebellum 30 .08 RPM
SRP007412_heart 37 .10 RPM
SRP007412_kidney 32 .06 RPM
SRP007412_liver 32 .67 RPM
SRP007412_testis 44 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012971 ortholog_one2one 2 retrogenes
retro_chof_2254, retro_chof_847,
Dipodomys ordii ENSDORG00000006595 ortholog_one2one 1 retrogene
retro_dord_491,
Echinops telfairi ENSETEG00000006478 ortholog_one2one 1 retrogene
retro_etel_434,
Homo sapiens ENSG00000147419 ortholog_one2one 1 retrogene
retro_hsap_1701,
Gorilla gorilla ENSGGOG00000009685 ortholog_one2one 1 retrogene
retro_ggor_1274,
Monodelphis domestica ENSMODG00000015976 ortholog_one2one 1 retrogene
retro_mdom_511,
Pongo abelii ENSPPYG00000018468 ortholog_one2one 2 retrogenes
retro_pabe_1364, retro_pabe_477,
Tarsius syrichta ENSTSYG00000000732 ortholog_one2one 1 retrogene
retro_tsyr_1364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_141 93.46 51.44
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Download FASTA sequences of all ENSPTRG00000020109 retrocopies