Parental gene:

RRM2B, ENSPTRG00000020481

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:100510074..100548426(-)


>ENSPTRG00000020481
ATGGGCGACCCGGAAAGGCCGGAAGCGGCCGGGCTGGATCAGGATGAGAGATCATCTTCAGACACCAACGAAAGTGAAAT
AAAGTCAAATGAAGAGCCACTCCTAAGAAAGAGTTCTCGCCGGTTTGTCATCTTTCCAATCCAGTACCCTGATATTTGGA
AAATGTATAAACAGGCACAGGCTTCCTTCTGGACAGCAGAAGAGGTCGACTTATCAAAGGATCTCCCTCACTGGAACAAG
CTTAAAGCAGATGAGAAGTACTTCATCTCTCACATCTTAGCCTTTTTTGCAGCCAGTGATGGAATTGTAAATGAAAATTT
GGTGGAGCGCTTTAGTCAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAATGTTC
ACTCAGAGATGTACAGTTTGCTGATAGACACTTACATCAGAGATCCCAAGAAAAGGGAATTTTTATTTAATGCAATTGAA
ACCATGCCCTATGTTAAGAAAAAAGCAGATTGGGCCTTGCGATGGATAGCAGATAGAAAATCTACTTTTGGGGAAAGAGT
GGTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCAGGATCTTTTGCTGCTATATTCTGGCTAAAGAAGAGAGGTCTTA
TGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGAGATGAAGGACTTCACTGTGACTTTGCTTGCCTGATGTTCCAA
TACTTAGTAAATAAGCCTTCAGAAGAAAGGGTCAGGGAGATCATTGTTGATGCTGTCAAAATTGAGCAGGAGTTTTTAAC
AGAAGCCTTGCCAGTTGGCCTCATTGGAATGAATTGCATTTTGATGAAACAGTACATTGAGTTTGTAGCTGACAGATTAC
TTGTGGAACTTGGATTCTCAAAGGTTTTTCAGGCAGAAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAA
ACAAATTTCTTTGAGAAACGAGTTTCAGAGTATCAGCGTTTTGCAGTTATGGCAGAAACCACAGATAACGTCTTCACCTT
GGATGCAGATTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 23 .76 RPM
SRP007412_cerebellum 28 .11 RPM
SRP007412_heart 28 .24 RPM
SRP007412_kidney 26 .33 RPM
SRP007412_liver 7 .82 RPM
SRP007412_testis 18 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012265 ortholog_one2one 4 retrogenes
retro_chof_1118, retro_chof_1233, retro_chof_277, retro_chof_692,
Callithrix jacchus ENSCJAG00000015923 ortholog_one2one 1 retrogene
retro_cjac_4130,
Echinops telfairi ENSETEG00000020338 ortholog_one2one 1 retrogene
retro_etel_1219,
Gorilla gorilla ENSGGOG00000003053 ortholog_one2one 1 retrogene
retro_ggor_3001,
Mus musculus ENSMUSG00000022292 ortholog_one2one 1 retrogene
retro_mmus_988,
Otolemur garnettii ENSOGAG00000004487 ortholog_one2one 1 retrogene
retro_ogar_2602,
Ictidomys tridecemlineatus ENSSTOG00000008543 ortholog_one2one 2 retrogenes
retro_itri_1555, retro_itri_877,
Tupaia belangeri ENSTBEG00000008855 ortholog_one2one 1 retrogene
retro_tbel_3693,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3204 79.93 82.05
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Download FASTA sequences of all ENSPTRG00000020481 retrocopies