Parental gene: | NOLC1, ENSPTRG00000023882 |
| Aliases: | None |
| Description: | Nucleolar and coiled-body phosphoprotein 1 [Source:UniProtKB/TrEMBL;Acc:K7BUI5] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:101365149..101375374(+) |
>ENSPTRG00000023882
ATGGCGGACGCCGGCATTCGCCGCGTGGTTCCCAGCGACCTGTATCCCCTCGTGCTCGGCTTCCTGCGCGATAACCAACT
CTCAGAGGTGGCCAATAAGTTCGCCAAAGCGACAGGAGCTACACAGCAGGATGCCAATGCCTCTTCCCTCTTAGACATCT
ATAGCTTCTGGCTCAAGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTAAGAAAGCTAAGAAG
AAGGCCTCATCCAGTGACAGTGAGGACAGCAGCGAGGAGGAGGAGGAAGTTCAAGGGCCTCCAGCAAAGAAGGCTGCTGT
ACCTGCCAAGCGAGTCGGTCTGCCCCCTGGGAAGGCTGCAGCCAAAGCATCAGAGAGTAGCAGCAGTGAAGAGTCCAGTG
ATGATGATGATGAGGAGGACCAAAAGAAACAGCCTGTCCAGAAGGGAGTTAAGCCCCAAGCCAAGGCAGCCAAAGCTCCT
CCTAAGAAGGCCAAGAGCTCTGATTCTGATTCTGACTCAAGCTCCGAGGATGAGCCACCAAAGAACCAGAAGCCAAAGAT
AACACCTGTGGCAGTTAAAGCTCAGACTAAAGCCCCTCCCAAACCAGCTCGAGCAGCACCTAAAGTAGCCAATGGTAAAG
CAGCCAGTAGCAGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGTGATGACTCAGAGGAGGAGAAGGCAGCAGCCACCCCC
AAGAAGGTCTGGGCCATAATTTCTGTCAGGGAAGAGACTGTACCTAAAAAGCAAGTTGTGGCCAAGGCCCCAGTGAAAGC
AGCTGCCACCCCTACCCGGAAGAGTTCCAGCAGTGAGGATTCCTCCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGA
AAAATAAACCAGGTCCCTACAGTTCAGTCCCCCCGCCTTCTGCTCCCCTACCAAAGAAGTCTCTGGGAACCCAGCCTCCC
AAGAAGGCTGTGGAGAAGCAGCAGCCTGTGGAAAGCAGTGAAGACAGCAGTGATGAGTGTGATTCAAGTTCTGAAGAAGA
GAAGAAACCCCCAACTAAGGCAGTAGTCTCTAAAGCAACCACTAAACCACCTCCAGCAAAGAAAGCAGCAGAGAGCTCTT
CAGACAGCTCAGACTCTGACAGCTCTGAGGATGATGAAGCTCCTTCTAAGCCAGCTGGTACCACCAAGAATTCTTCAAAT
AAGCCAGCTGTCACCACCAAGTCACCTGCAGTGAAGCCAGCTGCAGCCCCCAAGCAACCTGTGGGCGGTGGCCAGAAGCT
TCTGACGAGAAAGGCTGACAGCAGCTCCAGTGAGGAAGAGAGCAGCTCCAGTGAGGAGGAGAAGACAAAGAAGATGGTGG
CCACCACTAAGCCCAAGGCGACTGCCAAAGCAGCTCCACCTCTGCCTGCCAAGCAGGCTCCTCAGGGTAGTAGGGACAGC
AGCTCTGATTCAGACAGCTCCAGCAGTGAGGAGGAGGAAGAGAAGACATCTAAGTCTGCAGTTAAGAAGAAGCCACAGAA
GGTAGCAGGAGGTGCAGCCCCTTCCAAGCCAGCCTCTGCAAAGAAAGGAAAGGCTGAGAGCAGCAGCAGTTCTTCCTCTG
ATGACTCCAGTGAGGAAGAGGAAGAGAAGCCCAAGGGCAAGGGCTCTCCAAGACCACAAGCCCCCAAGGCCAATGGCACC
TCTGCACTGACTGCCCAGAATGGAAAAGCAGCTAAGAACAGTGAGGAGGAGGAAGAAGAAAAGAAAAAGGCGGCAGTGGT
AGTTTCCAAATCAGGTTCATTAAAGAAGCGGAAGCAGAATGAGGCTGCCAAGGAGGCAGAGACTCCTCAGGCCAAGAAGA
TAAAGCTTCAGACCCCTAACACATTTCCAAAAAGGAAGAAAGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGG
GAGGAGGAAATTGAGGTGGATTCACGAGTTGCAGACAACTCCTTTGATGCCAAGCGAGGTGCAGCCGGAGACTGGGGAGA
GCGAGCCAATCAGGTTTTGAAGTTCACCAAAGGCAAGTCCTTTCGGCATGAGAAAACCAAGAAGAAGCGGGGCAGCTACC
GGGGAGGCTCAATCTCTGTCCAGGTTAATTCTATTAAGTTTGACAGCGAGTGA
ATGGCGGACGCCGGCATTCGCCGCGTGGTTCCCAGCGACCTGTATCCCCTCGTGCTCGGCTTCCTGCGCGATAACCAACT
CTCAGAGGTGGCCAATAAGTTCGCCAAAGCGACAGGAGCTACACAGCAGGATGCCAATGCCTCTTCCCTCTTAGACATCT
ATAGCTTCTGGCTCAAGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTAAGAAAGCTAAGAAG
AAGGCCTCATCCAGTGACAGTGAGGACAGCAGCGAGGAGGAGGAGGAAGTTCAAGGGCCTCCAGCAAAGAAGGCTGCTGT
ACCTGCCAAGCGAGTCGGTCTGCCCCCTGGGAAGGCTGCAGCCAAAGCATCAGAGAGTAGCAGCAGTGAAGAGTCCAGTG
ATGATGATGATGAGGAGGACCAAAAGAAACAGCCTGTCCAGAAGGGAGTTAAGCCCCAAGCCAAGGCAGCCAAAGCTCCT
CCTAAGAAGGCCAAGAGCTCTGATTCTGATTCTGACTCAAGCTCCGAGGATGAGCCACCAAAGAACCAGAAGCCAAAGAT
AACACCTGTGGCAGTTAAAGCTCAGACTAAAGCCCCTCCCAAACCAGCTCGAGCAGCACCTAAAGTAGCCAATGGTAAAG
CAGCCAGTAGCAGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGTGATGACTCAGAGGAGGAGAAGGCAGCAGCCACCCCC
AAGAAGGTCTGGGCCATAATTTCTGTCAGGGAAGAGACTGTACCTAAAAAGCAAGTTGTGGCCAAGGCCCCAGTGAAAGC
AGCTGCCACCCCTACCCGGAAGAGTTCCAGCAGTGAGGATTCCTCCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGA
AAAATAAACCAGGTCCCTACAGTTCAGTCCCCCCGCCTTCTGCTCCCCTACCAAAGAAGTCTCTGGGAACCCAGCCTCCC
AAGAAGGCTGTGGAGAAGCAGCAGCCTGTGGAAAGCAGTGAAGACAGCAGTGATGAGTGTGATTCAAGTTCTGAAGAAGA
GAAGAAACCCCCAACTAAGGCAGTAGTCTCTAAAGCAACCACTAAACCACCTCCAGCAAAGAAAGCAGCAGAGAGCTCTT
CAGACAGCTCAGACTCTGACAGCTCTGAGGATGATGAAGCTCCTTCTAAGCCAGCTGGTACCACCAAGAATTCTTCAAAT
AAGCCAGCTGTCACCACCAAGTCACCTGCAGTGAAGCCAGCTGCAGCCCCCAAGCAACCTGTGGGCGGTGGCCAGAAGCT
TCTGACGAGAAAGGCTGACAGCAGCTCCAGTGAGGAAGAGAGCAGCTCCAGTGAGGAGGAGAAGACAAAGAAGATGGTGG
CCACCACTAAGCCCAAGGCGACTGCCAAAGCAGCTCCACCTCTGCCTGCCAAGCAGGCTCCTCAGGGTAGTAGGGACAGC
AGCTCTGATTCAGACAGCTCCAGCAGTGAGGAGGAGGAAGAGAAGACATCTAAGTCTGCAGTTAAGAAGAAGCCACAGAA
GGTAGCAGGAGGTGCAGCCCCTTCCAAGCCAGCCTCTGCAAAGAAAGGAAAGGCTGAGAGCAGCAGCAGTTCTTCCTCTG
ATGACTCCAGTGAGGAAGAGGAAGAGAAGCCCAAGGGCAAGGGCTCTCCAAGACCACAAGCCCCCAAGGCCAATGGCACC
TCTGCACTGACTGCCCAGAATGGAAAAGCAGCTAAGAACAGTGAGGAGGAGGAAGAAGAAAAGAAAAAGGCGGCAGTGGT
AGTTTCCAAATCAGGTTCATTAAAGAAGCGGAAGCAGAATGAGGCTGCCAAGGAGGCAGAGACTCCTCAGGCCAAGAAGA
TAAAGCTTCAGACCCCTAACACATTTCCAAAAAGGAAGAAAGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGG
GAGGAGGAAATTGAGGTGGATTCACGAGTTGCAGACAACTCCTTTGATGCCAAGCGAGGTGCAGCCGGAGACTGGGGAGA
GCGAGCCAATCAGGTTTTGAAGTTCACCAAAGGCAAGTCCTTTCGGCATGAGAAAACCAAGAAGAAGCGGGGCAGCTACC
GGGGAGGCTCAATCTCTGTCCAGGTTAATTCTATTAAGTTTGACAGCGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .57 RPM |
| SRP007412_cerebellum | 81 .41 RPM |
| SRP007412_heart | 25 .12 RPM |
| SRP007412_kidney | 29 .05 RPM |
| SRP007412_liver | 63 .50 RPM |
| SRP007412_testis | 35 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010062 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017832 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000166197 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015012 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002595 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014974 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3182 | 75.18 | 58.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000023882 retrocopies