Parental gene: | OOEP, ENSPTRG00000029545 |
| Aliases: | None |
| Description: | oocyte expressed protein [Source:HGNC Symbol;Acc:21382] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:73668846..73670080(-) |
>ENSPTRG00000029545
ATGGTCGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAACAGACACCGGCCCACTCCCTGGAGCAGCTGCGTAGGTT
ACCACTTCCGCTGCCACAGATTCGCATCCGGCCCTGGTGGTTTCCGGTGCAGGAACTGAGAGACCCTTTGGTGTTCTACC
TAGAGGCATGGCTGGCGGACGAGCTCTTTGGCCCAGACCGAGCCATAATTCCAGAAATGGAGTGGACGAGCCAGGCCCTG
CTGACAGTGGACATAGTGGACTCAGGGAACCTAGTCGAAATCACCGTTTTCGGGCGGCCCCGTGTACAGAATCGGGTGAA
GAGCATGCTCCTGTGCCTGGCATGGTTTCACCGAGAACATCGTGCCCGAGCTGAGAAGATGAAACACCTTGAGAAGAACT
TGAAGGCCCATGCATCAGACCCCCACTCTCCCCAGGATCCTGTTGCTTAA
ATGGTCGATGATGCTGGTGCCGCTGAGTCCCAGCGGGGCAAACAGACACCGGCCCACTCCCTGGAGCAGCTGCGTAGGTT
ACCACTTCCGCTGCCACAGATTCGCATCCGGCCCTGGTGGTTTCCGGTGCAGGAACTGAGAGACCCTTTGGTGTTCTACC
TAGAGGCATGGCTGGCGGACGAGCTCTTTGGCCCAGACCGAGCCATAATTCCAGAAATGGAGTGGACGAGCCAGGCCCTG
CTGACAGTGGACATAGTGGACTCAGGGAACCTAGTCGAAATCACCGTTTTCGGGCGGCCCCGTGTACAGAATCGGGTGAA
GAGCATGCTCCTGTGCCTGGCATGGTTTCACCGAGAACATCGTGCCCGAGCTGAGAAGATGAAACACCTTGAGAAGAACT
TGAAGGCCCATGCATCAGACCCCCACTCTCCCCAGGATCCTGTTGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .02 RPM |
| SRP007412_cerebellum | 0 .07 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .03 RPM |
| SRP007412_liver | 0 .03 RPM |
| SRP007412_testis | 3 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009962 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000203907 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016832 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000012754 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000017174 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000000416 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001204 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000025904 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000025957 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001487 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_329 | 64.29 | 65.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_408 | 68.42 | 63.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_3197 | 80.00 | 73.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000029545 retrocopies