Parental gene: | RPL27A, ENSPVAG00000002887 |
| Aliases: | None |
| Description: | ribosomal protein L27a [Source:HGNC Symbol;Acc:10329] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_1432:222717..225479(+) |
>ENSPVAG00000002887
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTCGGGGCCACGTGAGCCACGGCCATGGCCGCATCGGCAAACACCGGAA
GCACCCAGGAGGCCGAGGTAATGCTGGTGGCATGCATCACCACAGGATCAACTTTGACAAATATCACCCAGGTTACTTTG
GGAAAGTTGGTATGAGGCATTACCACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGATAAACTGTGGACC
TTGGTCAGTGAGCAGACACGGGTAAATGCTGCCAAAAACAAGACAGGAGCTGCTCCTATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGGAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGGGTGTTGGGGGGGCCTGTGTCTTGGTAGCTTGA
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTCGGGGCCACGTGAGCCACGGCCATGGCCGCATCGGCAAACACCGGAA
GCACCCAGGAGGCCGAGGTAATGCTGGTGGCATGCATCACCACAGGATCAACTTTGACAAATATCACCCAGGTTACTTTG
GGAAAGTTGGTATGAGGCATTACCACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGATAAACTGTGGACC
TTGGTCAGTGAGCAGACACGGGTAAATGCTGCCAAAAACAAGACAGGAGCTGCTCCTATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGGAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGGGTGTTGGGGGGGCCTGTGTCTTGGTAGCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004205 | possible_ortholog | 15 retrogenes | |
| Bos taurus | ENSBTAG00000005349 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000006936 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011775 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002296 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016616 | possible_ortholog | 7 retrogenes | |
| Mus musculus | ENSMUSG00000046364 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005442 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014214 | possible_ortholog | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_54 | 71.57 | 66.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_84 | 80.00 | 93.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pvam_93 | 72.48 | 99.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pvam_119 | 69.09 | 71.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pvam_198 | 85.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pvam_392 | 84.56 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pvam_546 | 62.81 | 80.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pvam_575 | 65.93 | 59.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pvam_837 | 69.29 | 84.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pvam_993 | 70.89 | 52.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_pvam_1087 | 53.15 | 74.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_pvam_1130 | 79.17 | 95.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_pvam_1135 | 81.63 | 97.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_pvam_1305 | 74.83 | 93.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000002887 retrocopies