Parental gene: | C18orf21, ENSPVAG00000009174 |
| Aliases: | None |
| Description: | chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:28802] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_1884:124370..130727(+) |
>ENSPVAG00000009174
ATGAGGCAGAAGCATTACCTTGAGGCTGCCGCGCGGAAACTGCAAGAGAGCTGTCCGGGCCAGGCCCGCTATCTCCTCTG
GGCCTACAGCTCGACACACGATGCTAAAAGCACTTTTGAAGGAACATGTCCATACTGTTTCCAGTTGCTGGTTCTGGATA
ACTATCGAGTGCGCCTCAAACCCAAGCCCAAACTGACACCCAGAATACAGAAACTTCTTAATCGAGAAGCAAGAAATTAT
ACACTCAGTTTTAAAGAAGCAAAAATTGTGGAAAAGTACAAAGACTCCAAAAGTGTATTGTTGATCACTTGTAAAACATG
CAACAGAACAGTTAAACATCATGGTAAAAGTAGAAGCTTTCTATCAGCATTGAAGAGCAATCCTACCACTCCTACGAGTA
AACTCAGCCTGAAGACACCAGAGAGAAAGACTCTAAGTTCTGCAGACCTAAATCATGATGTGTCTGGTTCTAAAGGCAAA
AGCCCAGCACTGATTTTCAGAACACCTACATCTGGACAGTCAACACCCACTTGCTCCTCAAAGAATACGAGCAAAACAAA
GAAACGCTTCTCTCAACTGAAAATGTTGCTTAGTCAAAGTGAATCCCAGAAGAGTCCAAAAGTGGACTTCAGAAATTTCT
TATCTTCTTTGAAGGATGGACTAAAA
ATGAGGCAGAAGCATTACCTTGAGGCTGCCGCGCGGAAACTGCAAGAGAGCTGTCCGGGCCAGGCCCGCTATCTCCTCTG
GGCCTACAGCTCGACACACGATGCTAAAAGCACTTTTGAAGGAACATGTCCATACTGTTTCCAGTTGCTGGTTCTGGATA
ACTATCGAGTGCGCCTCAAACCCAAGCCCAAACTGACACCCAGAATACAGAAACTTCTTAATCGAGAAGCAAGAAATTAT
ACACTCAGTTTTAAAGAAGCAAAAATTGTGGAAAAGTACAAAGACTCCAAAAGTGTATTGTTGATCACTTGTAAAACATG
CAACAGAACAGTTAAACATCATGGTAAAAGTAGAAGCTTTCTATCAGCATTGAAGAGCAATCCTACCACTCCTACGAGTA
AACTCAGCCTGAAGACACCAGAGAGAAAGACTCTAAGTTCTGCAGACCTAAATCATGATGTGTCTGGTTCTAAAGGCAAA
AGCCCAGCACTGATTTTCAGAACACCTACATCTGGACAGTCAACACCCACTTGCTCCTCAAAGAATACGAGCAAAACAAA
GAAACGCTTCTCTCAACTGAAAATGTTGCTTAGTCAAAGTGAATCCCAGAAGAGTCCAAAAGTGGACTTCAGAAATTTCT
TATCTTCTTTGAAGGATGGACTAAAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000029548 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000021041 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000025449 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000000626 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000141428 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026334 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018782 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025605 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024273 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006237 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000028046 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011163 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009110 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009973 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000016670 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010817 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_629 | 64.62 | 86.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_1086 | 63.50 | 60.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pvam_1488 | 52.03 | 65.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000009174 retrocopies