Parental gene: | SFT2D1, ENSPVAG00000012673 |
| Aliases: | None |
| Description: | SFT2 domain containing 1 [Source:HGNC Symbol;Acc:21102] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | scaffold_19450:987..13606(-) |
>ENSPVAG00000012673
ATGGAGAAGCTGCGGCGGGTCCTGAGCGGCCAGGACGACGAGGAGCAGGGCCTGACCTCGCAGGTCCTGGACGCCTCGTC
CCTGAGCTTCAGCACCAGGCTGAGGTGGTTCGCCATCTGCTTCGTGAGCGGCGTGCTCTTCTCCATCCTCGGGACCGGAT
TGCTGTGGCTTCCTGGTGGCTTAAAGCTTTTTGCAGTGTTTTATACCTTTGGAAATATCGCTGCATTAGCCAGCACGTGC
TTTTTAATGGGACCCATGAAGCAACTGAAGAAAATGTTTGAAACAACAAGATTGCTTGCAACAATTATTATGATCTTGTG
TTTCGTGTTGACCCTGTGCGCTGCTCTCTGGTGGCATAAGAAGGGCCTGGCCTTATTATTCTGCATATTGCAGTTCTTGT
CGATGACCTGGTACAGTCTGTCCTACATCCCCTACGCAAGGGATGCAGTGATTAAATGCTGTTCTTCTCTCCTAAGTTGA
ATGGAGAAGCTGCGGCGGGTCCTGAGCGGCCAGGACGACGAGGAGCAGGGCCTGACCTCGCAGGTCCTGGACGCCTCGTC
CCTGAGCTTCAGCACCAGGCTGAGGTGGTTCGCCATCTGCTTCGTGAGCGGCGTGCTCTTCTCCATCCTCGGGACCGGAT
TGCTGTGGCTTCCTGGTGGCTTAAAGCTTTTTGCAGTGTTTTATACCTTTGGAAATATCGCTGCATTAGCCAGCACGTGC
TTTTTAATGGGACCCATGAAGCAACTGAAGAAAATGTTTGAAACAACAAGATTGCTTGCAACAATTATTATGATCTTGTG
TTTCGTGTTGACCCTGTGCGCTGCTCTCTGGTGGCATAAGAAGGGCCTGGCCTTATTATTCTGCATATTGCAGTTCTTGT
CGATGACCTGGTACAGTCTGTCCTACATCCCCTACGCAAGGGATGCAGTGATTAAATGCTGTTCTTCTCTCCTAAGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009311 | ortholog_one2one | 3 retrogenes | |
| Bos taurus | ENSBTAG00000002993 | possible_ortholog | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000000811 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000019479 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000073468 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001200 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006302 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000003408 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017165 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000045 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_465 | 61.03 | 84.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_559 | 75.54 | 85.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pvam_1340 | 61.11 | 56.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000012673 retrocopies