Parental gene: | MRPL30, ENSRNOG00000018511 |
| Aliases: | None |
| Description: | 39S ribosomal protein L30, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P0C2C1] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 9:44181254..44270174(+) |
>ENSRNOG00000018511
ATGGCTGGGGTTCTGCGCTCAGTATTTCAGAGGCCTCCAGGCAGACTACAGACTGTGAAGAAAGGTGCAGAATCTCTCAT
TGGTACAGAGTGGATTCGTCACAAATTTACCAGATCAAGAATTCCAGATAAAGTATTTCAGCCTAGACCTGAAGATCATG
AAAAATACGGTGGAGACCCCCAAAACCCCCATAAACTGCACATTGTTACAAGAATAAGAAGCACAAAGAGGCGTCCATAC
TGGGAGAAAGATACGATCAAGATGCTGGGACTACAGAAGGCACACAGCCCTCAGATCCACAAGAACATCCCGTCAGTGAA
TGCAAAGCTAAAAGTGGTTAAACACTTGATACGCATCCAGCCCCTGAAGCTGCCACAGGGACTTCCCACAGAAGAGACCA
TGTCCAGCACGTGCCTCAAGAGCACTGGGGAATTGGTGGTGCAGTGGCATCTGAAGCCTGTGGAGCAGGAAGCAAAGTCC
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 0 .29 RPM |
| SRP017611_kidney | 0 .42 RPM |
| SRP017611_liver | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013344 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000038949 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000031628 | ortholog_many2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005804 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007085 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000018648 | ortholog_one2many | 5 retrogenes | |
| Equus caballus | ENSECAG00000015993 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005006 | ortholog_one2many | 4 retrogenes | |
| Felis catus | ENSFCAG00000024233 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000241962 | ortholog_many2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011677 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011627 | ortholog_one2many | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000029851 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011085 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000026087 | ortholog_one2many | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026974 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004111 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002241 | ortholog_many2many | 11 retrogenes | |
| Ochotona princeps | ENSOPRG00000007331 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012275 | ortholog_one2many | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006587 | ortholog_one2many | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049330 | within_species_paralog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008183 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005345 | ortholog_one2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004937 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_570 | 94.41 | 100.00 | Please wait, loading  |
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| 2. | retro_rnor_916 | 86.25 | 100.00 | Please wait, loading |
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| 3. | retro_rnor_2018 | 86.73 | 60.62 | Please wait, loading |
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| 4. | retro_rnor_2683 | 71.61 | 95.00 | Please wait, loading |
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| 5. | retro_rnor_2684 | 71.61 | 95.00 | Please wait, loading |
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| 6. | retro_rnor_2873 | 81.13 | 98.12 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000018511 retrocopies