RetrogeneDB ID: | retro_pvam_764 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_11099:13418..13906(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSPVAG00000006587 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.07 % |
Parental protein coverage: | 98.25 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | KRELIRLMAGILRSIVQRPPGRLQTMAKSMESLICTDWIR-HKFTKSRIPDKVFQPSPADHEKYGGDPQH |
KR....L.A.I..SI.Q....R..T.....E.L.CTD.I..H..T.S.IPD.VFQP.PA.H...GGDPQH | |
Retrocopy | KRTISTLVAEISPSIGQSH--RRTTHYTGVEHLFCTDCIL<HGLTRSTIPDTVFQPLPANHDTCGGDPQH |
Parental | PHKLHVVTRIRSTKRRPYW-EKDVIKMLGLEKAHTPQVHKNIPSVNAKLKVVKH-LIRIKPLRLPQ-GLP |
P.K...V.RI.STK..P.W.EK..IK..GLE.AHT..V.KNIPS.NAKLK.VKH.L..IK..RLPQ.GLP | |
Retrocopy | PPKRYLVIRI*STKIHPLW<EKITIKKSGLEEAHTSLVYKNIPSMNAKLKAVKH<LLGIKLPRLPQ<GLP |
Parental | AEEDMAHTCLKSNGELVVQWHLSPADQDATKS |
A.ED.......S...LVV...L.P.DQ.A.KS | |
Retrocopy | A-EDVCDLYPMSTRKLVV-GPLNPVDQEAIKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |