Parental gene: | Psme1, ENSRNOG00000019041 |
| Aliases: | None |
| Description: | proteasome activator complex subunit 1 [Source:RefSeq peptide;Acc:NP_058960] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 15:38146265..38149140(+) |
>ENSRNOG00000019041
ATGGCTACACTGAGGGTCCATCCTGAAGCCCAAGCCAAGGTGGATGTGTTTCGTGAGGACCTGTGTAGTAAGACAGAGAA
CCTGCTTGGGAGCTATTTTCCCAAGAAGATCTCAGAGTTGGATGCCTTCTTAAAGGAGCCAGCTCTCAACGAAGCCAACC
TGAGCAATCTGAAGGCTCCATTGGACATCCCAGTCCCTGATCCCGTCAAGGAGAAAGAGAAGGAGGAGCGGAAGAAGCAA
CAGGAGAAGGAAGAGAAGGACGAAAAGAAGAAAGGGGACGAAGACGACAAAGGTCCTCCCTGTGGTCCAGTGAACTGCAA
TGAGAAGATTGTGGTCCTCCTGCAACGCCTAAAGCCCGAGATCAAGGATGTCATTGAGCAACTCAACCTGGTTACTACCT
GGTTGCAGCTACAGATACCTCGGATAGAGGATGGGAATAATTTTGGCGTGGCTGTCCAGGAAAAGGTGTTTGAGCTGATG
ACCAGCCTTCATACCAAGCTGGAAGGCTTCCAAACGCAGATCTCTAAGTACTTCTCCGAGAGGGGTGATGCCGTGGCCAA
AGCAGCCAAGCAGCCTCATGTGGGTGATTATCGGCAGCTGGTGCATGAGCTGGACGAGGCGGAATACCAGGAGATCCGGC
TGATGGTCATGGAGATCCGTAACGCTTATGCTGTGTTATATGACATCATCCTGAAGAACTTTGAGAAGCTCAAGAAGCCC
CGTGGAGAGACAAAGGGGATGATCTATTGA
ATGGCTACACTGAGGGTCCATCCTGAAGCCCAAGCCAAGGTGGATGTGTTTCGTGAGGACCTGTGTAGTAAGACAGAGAA
CCTGCTTGGGAGCTATTTTCCCAAGAAGATCTCAGAGTTGGATGCCTTCTTAAAGGAGCCAGCTCTCAACGAAGCCAACC
TGAGCAATCTGAAGGCTCCATTGGACATCCCAGTCCCTGATCCCGTCAAGGAGAAAGAGAAGGAGGAGCGGAAGAAGCAA
CAGGAGAAGGAAGAGAAGGACGAAAAGAAGAAAGGGGACGAAGACGACAAAGGTCCTCCCTGTGGTCCAGTGAACTGCAA
TGAGAAGATTGTGGTCCTCCTGCAACGCCTAAAGCCCGAGATCAAGGATGTCATTGAGCAACTCAACCTGGTTACTACCT
GGTTGCAGCTACAGATACCTCGGATAGAGGATGGGAATAATTTTGGCGTGGCTGTCCAGGAAAAGGTGTTTGAGCTGATG
ACCAGCCTTCATACCAAGCTGGAAGGCTTCCAAACGCAGATCTCTAAGTACTTCTCCGAGAGGGGTGATGCCGTGGCCAA
AGCAGCCAAGCAGCCTCATGTGGGTGATTATCGGCAGCTGGTGCATGAGCTGGACGAGGCGGAATACCAGGAGATCCGGC
TGATGGTCATGGAGATCCGTAACGCTTATGCTGTGTTATATGACATCATCCTGAAGAACTTTGAGAAGCTCAAGAAGCCC
CGTGGAGAGACAAAGGGGATGATCTATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 89 .96 RPM |
| SRP017611_kidney | 100 .49 RPM |
| SRP017611_brain | 20 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016433 | ortholog_many2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000021395 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000011924 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000016855 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000005583 | ortholog_many2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014712 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000022216 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008620 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_50 | 93.57 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000019041 retrocopies