Parental gene:

ZFAND6, ENSSSCG00000001779

Aliases:None
Description:zinc finger, AN1-type domain 6 [Source:HGNC Symbol;Acc:30164]
Organism:Pig (Sus scrofa)
Coordinates:7:54475807..54542954(+)


>ENSSSCG00000001779
AGGAACATGGCTCAAGAAACTAATCACAGCCAAGTGCCTATGCTTTGTTCCACTGGCTGCGGATTTTATGGAAACCCTCG
TACAAACGGCATGTGTTCAGTATGCTATAAAGAACATCTTCAAAGACAGAATAGTAGTAATGGTAGAATAAGCCCACCTG
ATGAGGTGTTGGCCGGCTCAGGGTACAGAATCACTAATACGAGTAGTCTGTCTGAGTCTTTACCAGTTCAGTGCACAGAT
GGCAGTGTCCCAGAAGCTCAGTCAACCCCTGTACCAAATCAGTCACTTTTATCAGAATCTGTAGCATCATCCCAAGTGGA
CAGTACATCTGTGGATAAAGCAATACCTGAAACAGAAGACCTGCAAGCTTCAGTATCAGATACGGCACAGCAGCCATCTG
AAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACT
GGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTACACCGTTACTCAGATGTACACAATTGCTCTTACAATTACAA
AGCTGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAGATTTGA

Library Parental gene expression (RPM)
SRP014902_placenta 32 .25 RPM
SRP014902_testis 47 .81 RPM
SRP018288_heart 48 .38 RPM
SRP018288_kidney 128 .75 RPM
SRP018288_liver 88 .91 RPM
SRP018288_lung 31 .26 RPM
SRP018856_adipose 36 .15 RPM
SRP035408_brain 35 .83 RPM
SRP035408_liver 58 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012321 ortholog_one2one 1 retrogene
retro_btau_593,
Choloepus hoffmanni ENSCHOG00000009491 ortholog_one2one 2 retrogenes
retro_chof_1516, retro_chof_2072,
Felis catus ENSFCAG00000012931 ortholog_one2one 2 retrogenes
retro_fcat_1024, retro_fcat_1998,
Homo sapiens ENSG00000086666 ortholog_one2one 1 retrogene
retro_hsap_4153,
Gorilla gorilla ENSGGOG00000015621 ortholog_one2one 1 retrogene
retro_ggor_2790,
Loxodonta africana ENSLAFG00000006722 ortholog_one2one 1 retrogene
retro_lafr_587,
Monodelphis domestica ENSMODG00000019428 ortholog_one2one 1 retrogene
retro_mdom_685,
Nomascus leucogenys ENSNLEG00000008870 ortholog_one2one 1 retrogene
retro_nleu_1387,
Pan troglodytes ENSPTRG00000007361 ortholog_one2one 2 retrogenes
retro_ptro_1375, retro_ptro_2824,
Rattus norvegicus ENSRNOG00000013506 ortholog_one2one 1 retrogene
retro_rnor_2019,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1206 79.82 52.15
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2. retro_sscr_1207 79.82 52.15
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Download FASTA sequences of all ENSSSCG00000001779 retrocopies