Parental gene:

OTX2, ENSSSCG00000005063

Aliases:None
Description:orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:8522]
Organism:Pig (Sus scrofa)
Coordinates:1:206642520..206647206(-)


>ENSSSCG00000005063
ATGATGTCTTATCTTAAGCAACCGCCTTACGCAGTCAATGGGCTGAGTCTGACCACCTCGGGCATGGACTTGCTGCACCC
CTCGGTGGGCTACCCGGCCACCCCTCGGAAACAGCGGCGGGAGAGGACGACGTTCACCCGAGCGCAGCTAGACGTGCTGG
AAGCACTGTTTGCTAAGACCCGATACCCAGATATCTTCATGCGGGAAGAGGTGGCACTGAAAATCAACTTGCCGGAGTCC
AGGGTTCAGGTATGGTTTAAGAATCGAAGAGCTAAGTGCCGCCAACAGCAGCAACAACAGCAGAATGGAGGTCAAAACAA
AGTGAGACCTGCCAAAAAGAAGACATCTCCTGCTCGGGAAGTGAGTTCAGAGAGTGGAACAAGTGGCCAGTTCACTCCCC
CCTCTAGCACCTCAGTCCCGGCCATTTCCAGCAGCAGTGCTCCTGTGTCTATCTGGAGCCCAGCTTCCATCTCCCCACTG
TCAGATCCCTTGTCCACCTCCTCTTCCTGCATGCAGAGGTCCTACCCCATGACCTATACTCAGGCTTCAGGTTATAGTCA
AGGATATGCTGGCTCAACTTCCTACTTTGGGGGCATGGACTGTGGATCTTATTTGACCCCTATGCATCACCAGCTTCCTG
GACCAGGGACCACACTCAGTCCCATGGGTACCAATGCAGTCACCAGCCATCTCAATCAGTCCCCAGCTTCTCTGTCCACC
CAGGGATATGGAGCTTCAAGCTTGGGTTTTAACTCGACTACTGATTGCTTGGATTATAAGGACCAAACTGCCTCCTGGAA
GCTTAACTTCAATGCTGACTGCTTGGATTATAAAGATCAGACATCCTCGTGGAAATTCCAGGTTTTGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .00 RPM
SRP014902_testis 1 .13 RPM
SRP018288_heart 0 .00 RPM
SRP018288_kidney 0 .00 RPM
SRP018288_liver 0 .00 RPM
SRP018288_lung 0 .00 RPM
SRP018856_adipose 0 .17 RPM
SRP035408_brain 0 .00 RPM
SRP035408_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014741 ortholog_one2one 1 retrogene
retro_btau_687,
Callithrix jacchus ENSCJAG00000018583 ortholog_one2one 1 retrogene
retro_cjac_1380,
Cavia porcellus ENSCPOG00000003420 ortholog_one2one 1 retrogene
retro_cpor_149,
Tursiops truncatus ENSTTRG00000004650 ortholog_one2one 1 retrogene
retro_ttru_473,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_417 81.97 100.00
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Download FASTA sequences of all ENSSSCG00000005063 retrocopies