Parental gene:

ENSSSCG00000009373

Aliases:None
Description:Sus scrofa solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (SLC25A15), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001243910]
Organism:Pig (Sus scrofa)
Coordinates:11:15797582..15843547(+)


>ENSSSCG00000009373
ATGAAGTCCAATCCTGCCATCCAAGCTGCCATTGACCTCACGGCGGGGGCTGCAGGGGGCACAGCGTGCGTCTTGACCGG
GCAGCCCTTCGACACGATGAAAGTGAAGATGCAGACGTTTCCCGACCTGTACAGGGGCCTCACCGACTGCTGCCTCAAGA
CCTACTCGCAGGTGGGCTTCCGGGGCTTCTACAAGGGGACCAGCCCGGCACTGATCGCCAACATCGCCGAGAACTCCGTC
CTCTTCATGTGCTACGGCTTCTGCCAGCAGGTGGTGCGGAAGGTGGCGGGACTGGACAGGCAGGCGAAGCTGAGTGACCT
GCAGAACGCGGCTGCTGGCTCCTTCGCCTCTGCCTTTGCTGCCCTGGTCCTCTGCCCCACCGAGCTGGTGAAGTGCCGGC
TGCAGACCATGTATGAGATGGAGACGTCAGGAAAGATAGCCAAAAGCCAGAACACAGTTTGGTCTGTCGTGAAGAGCATC
CTTCGCAAAGACGGCCCCTTGGGCTTCTACCATGGACTGTCGAGCACTTTACTTCGAGAAGTACCGGGCTACTTCTTCTT
CTTCGGGGGCTATGAACTGAGCCGATCTTTTTTTGCATCGGGGAGATCAAAAGATGAATTAGGCCCTGTCCCTTTGATGT
TAAGTGGAGGGTTTGGCGGCATCTGCCTCTGGCTTGCTGTTTACCCCGTGGATTGTATCAAATCCAGAATTCAAGTTCTT
TCCATGTCTGGAAAACAGGCAGGATTCATTGGAACCTTTATAAGTGTTGTGAAAAATGAAGGGATAACGGCTCTGTACTC
TGGACTGAAACCTACCATGATTCGTGCGTTCCCTGCCAATGGGGCACTCTTTTTGGCCTACGAATACAGCCGGAAGTTGA
TGATGAGCCAGTTTGAAGCATACTGA

Library Parental gene expression (RPM)
SRP014902_placenta 5 .84 RPM
SRP014902_testis 14 .57 RPM
SRP018288_heart 9 .06 RPM
SRP018288_kidney 174 .16 RPM
SRP018288_liver 222 .75 RPM
SRP018288_lung 4 .17 RPM
SRP018856_adipose 5 .77 RPM
SRP035408_brain 5 .62 RPM
SRP035408_liver 215 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011723 ortholog_one2one 1 retrogene
retro_amel_5,
Bos taurus ENSBTAG00000011647 ortholog_one2one 1 retrogene
retro_btau_1581,
Canis familiaris ENSCAFG00000005955 ortholog_one2one 1 retrogene
retro_cfam_211,
Choloepus hoffmanni ENSCHOG00000004899 ortholog_one2one 3 retrogenes
retro_chof_1643, retro_chof_494, retro_chof_561,
Erinaceus europaeus ENSEEUG00000014870 ortholog_one2one 1 retrogene
retro_eeur_329,
Mus musculus ENSMUSG00000031482 ortholog_one2one 1 retrogene
retro_mmus_75,
Oryctolagus cuniculus ENSOCUG00000016684 ortholog_one2one 2 retrogenes
retro_ocun_192, retro_ocun_1927,
Ochotona princeps ENSOPRG00000014616 ortholog_one2one 1 retrogene
retro_opri_7,
Rattus norvegicus ENSRNOG00000011881 ortholog_one2one 1 retrogene
retro_rnor_130,
Sorex araneus ENSSARG00000002472 ortholog_one2one 1 retrogene
retro_sara_30,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_688 83.33 99.67
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Download FASTA sequences of all ENSSSCG00000009373 retrocopies