Parental gene: | SLC25A36, ENSSSCG00000011669 |
| Aliases: | None |
| Description: | solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 [Source:HGNC Symbol;Acc:25554] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 13:89609654..89630435(+) |
>ENSSSCG00000011669
TTCGCAAAGTCACAGTTGCTTACTCATTTCATAGCTCTGCACAGATGTGGTGGTACAGTGGGAGCTATTCTGACATGTCC
ACTGGAAGTTGTAAAAACACGGCTGCAGTCATCTTCTGTGACACTTTATATTTCTGAAGTTCACCTGAACACCATGGCTG
GAGCCAGTGTCAACCGAGTAGTGTCTCCTGGACCTCTCCATTGCTTAAAAGTGATCTTGGAAAAAGAAGGACCTCGTTCC
TTGTTTAGAGGATTAGGCCCCAATTTAGTGGGGGTGGCCCCTTCCAGAGCAATATATTTTGCTGCTTATTCAAACTGCAA
GGAAAAGTTGAATGGTTTATTTGATCCTGATTCTACCCAGGTACACATGATTTCAGCTGCAATGGCAGGTTTTACCGCAA
TCACAGCGACCAACCCCATTTGGCTTATAAAGACTCGGTTACAACTTGATGCAAGAAATCGTGGGGAAAAGCGAATGGGC
GCTTTTGAATGTGTCCGTAAAGTGTATCAGACAGATGGACTTAGAGGATTTTATAGGGGCATGTCTGCTTCGTATGCTGG
CATATCAGAGACTGTTATCCATTTCGTTATTTATGAAAGTATTAAGCAAAAACTGCTGGAATATAAGATTGCTTCTACAA
TGGAAACTGAAGAAGAGTCTGTAAAAGAAGCATCAGATTTTGTGGGGATGATGCTAGCTGCTGCCACCTCAAAAACGTGT
GCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACTACGTGAAGAGGGAACAAAATACAGATCTTTTTTTCA
GACATTATCTTTGCTTGTTCAAGAAGAAGGCTATGGGTCTCTTTACCGTGGTCTGACAACTCATCTGGTGAGACAGATTC
CAAACACAGCCATTATGATGGCCACCTATGAATTGGTGGTCTACCTGCTCAATGGATAG
TTCGCAAAGTCACAGTTGCTTACTCATTTCATAGCTCTGCACAGATGTGGTGGTACAGTGGGAGCTATTCTGACATGTCC
ACTGGAAGTTGTAAAAACACGGCTGCAGTCATCTTCTGTGACACTTTATATTTCTGAAGTTCACCTGAACACCATGGCTG
GAGCCAGTGTCAACCGAGTAGTGTCTCCTGGACCTCTCCATTGCTTAAAAGTGATCTTGGAAAAAGAAGGACCTCGTTCC
TTGTTTAGAGGATTAGGCCCCAATTTAGTGGGGGTGGCCCCTTCCAGAGCAATATATTTTGCTGCTTATTCAAACTGCAA
GGAAAAGTTGAATGGTTTATTTGATCCTGATTCTACCCAGGTACACATGATTTCAGCTGCAATGGCAGGTTTTACCGCAA
TCACAGCGACCAACCCCATTTGGCTTATAAAGACTCGGTTACAACTTGATGCAAGAAATCGTGGGGAAAAGCGAATGGGC
GCTTTTGAATGTGTCCGTAAAGTGTATCAGACAGATGGACTTAGAGGATTTTATAGGGGCATGTCTGCTTCGTATGCTGG
CATATCAGAGACTGTTATCCATTTCGTTATTTATGAAAGTATTAAGCAAAAACTGCTGGAATATAAGATTGCTTCTACAA
TGGAAACTGAAGAAGAGTCTGTAAAAGAAGCATCAGATTTTGTGGGGATGATGCTAGCTGCTGCCACCTCAAAAACGTGT
GCCACAACTATAGCATATCCACATGAAGTTGTAAGAACAAGACTACGTGAAGAGGGAACAAAATACAGATCTTTTTTTCA
GACATTATCTTTGCTTGTTCAAGAAGAAGGCTATGGGTCTCTTTACCGTGGTCTGACAACTCATCTGGTGAGACAGATTC
CAAACACAGCCATTATGATGGCCACCTATGAATTGGTGGTCTACCTGCTCAATGGATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 8 .89 RPM |
| SRP014902_testis | 19 .38 RPM |
| SRP018856_adipose | 25 .19 RPM |
| SRP018288_kidney | 32 .51 RPM |
| SRP018288_lung | 21 .79 RPM |
| SRP018288_liver | 3 .20 RPM |
| SRP018288_heart | 19 .04 RPM |
| SRP035408_liver | 1 .09 RPM |
| SRP035408_brain | 2 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000010094 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027489 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022153 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000032449 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002085 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007958 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001759 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003288 | ortholog_one2many | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000008292 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_871 | 54.96 | 75.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000011669 retrocopies