Parental gene: | GK, ENSSSCG00000012202 |
| Aliases: | None |
| Description: | glycerol kinase [Source:HGNC Symbol;Acc:4289] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | X:28788859..28871823(+) |
>ENSSSCG00000012202
ATGGCAGCCGCGAATAAAGCAGTTTTGGGACCGTTGGTGGGAGCAGTGGACCAGGGCACCAGCTCGACGCGCTTTTTGGT
TTTCAACTCAAAAACAGCTGAACTACTTAGTCATCATCAAGTAGAACTAAAACAAGAGTTTCCAAAAGAAGGATGGGTGG
AACAGGACCCTAAGGAAATTCTGAATTCTGTATATGAGTGTATAGAGAAAACCTGTGAGAAACTTGGACAGCTCAATATT
GATATTTCCAACATAAAAGCTATCGGTGTCAGTAACCAGAGGGAAACCACTGTGGTCTGGGACAAGTTAACTGGAGAGCC
TCTCTACAATGCCGTAGTGTGGCTTGACCTAAGAACCCAGTCTACCGTTGAGAATCTTAGTAAAAGAATTCCCGGAAATA
ATAACTTTGTCAAGTCCAAGACAGGCCTTCCACTTAGCACTTATTTCAGTGCAGTGAAACTTCGTTGGCTCCTTGACAAT
GTGAGAAAAGTTCAAAAAGCAGTTGAAGAAGAGAGAGCTCTTTTTGGGACCGTTGATTCATGGCTTATTTGGTGCTTGAC
AGGAGGAGCCAATGGAGGTGTCCATTGTACAGATGTAACAAATGCAAGCAGGACGATGCTTTTCAACATTCATTCTTTGG
AATGGGATAAAGAACTCTGCGAATTTTTTGAAATTCCAATGAAAATTCTTCCAAATGTTCGGAGTTCTTCTGAGATCTAT
GGCCTAATGAAAGCTGGGGCCTTGGAAGGTGTGCCAATATCCGGGTGTTTGGGTGACCAGTCTGCTGCATTGGTGGGACA
AATGTGCTTCCAGGATGGACAAGCCAAAAACACGTATGGAACAGGCTGTTTCTTATTATGTAACACTGGCCGTAAGTGTG
TATTTTCTGAACATGGCCTTCTGACTACAGTGGCTTACAAACTTGGCAGAGACAAACCAGTATATTATGCATTAGAAGGT
TCGGTAGCTATAGCTGGTGCTGTTGTTCGCTGGCTAAGAGACAATCTTGGAATTATAAAGACCTCTGAGGAAATTGAAAA
ACTTGCTAAAGAAGTAGGTACTTCTTATGGCTGCTATTTCGTCCCAGCGTTTTCAGGGCTGTATGCACCATATTGGGAGC
CTAGTGCAAGAGGGATCATCTGTGGGCTTACTCAGTTCACCAATAGATGCCATATTGCTTTTGCTGCATTGGAAGCTGTT
TGTTTCCAAACCCGAGAGATTTTGGATGCCATGAACCGTGACTGTGGAATGCCACTCAGACACCTGCAGGTAGATGGAGG
GATGACCAACAACAAAATTCTCATGCAGCTCCAAGCAGACATTCTATATATCCCAGTAGTGAAGCCCTCCATGCCTGAAA
CAACTGCCCTGGGAGCCGCCATGGCAGCAGGAGCTGCTGAAGGAGTTGGTGTATGGAGTCTTGACCCTGAGGACTTGTCA
GCTGTCACAGTGGAGCGGTTTGAACCTCAGATCAACGCTGAGGAAAGTGAAATCCGTTATTCTACGTGGAAGAAAGCCGT
GATGAAGTCAATGGGTTGGGTTACAACTCAGTCTTCAGAAAGTGGTATGCCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 4 .25 RPM |
| SRP014902_testis | 2 .55 RPM |
| SRP018288_heart | 30 .04 RPM |
| SRP018288_kidney | 184 .80 RPM |
| SRP018288_liver | 110 .82 RPM |
| SRP018288_lung | 20 .67 RPM |
| SRP018856_adipose | 22 .26 RPM |
| SRP035408_brain | 4 .83 RPM |
| SRP035408_liver | 94 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000003261 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000004264 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002417 | ortholog_many2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013023 | possible_ortholog | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000012460 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000006470 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_59 | 86.45 | 100.00 | Please wait, loading  |
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| 2. | retro_sscr_479 | 94.66 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSSSCG00000012202 retrocopies