Parental gene:

ENSMODG00000002417

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:4:66693993..66751076(-)


>ENSMODG00000002417
ATGGCAGCCGGGAAGGCGAACTTGGGGCCGTTGGTGGGGGCCGTTGATCAGGGCACCAGCTCCACGCGTTTTCTGGTTTT
CAATTCAAAAACAGCTGAACTACTTAGTCATCATCAAGTGGAACTAGAGCAGAAGTTCCCTAAAGAAGGATGGGTGGAAC
AAGATCCCAAGGAGATTTTGCAGTCTGTCTATGAATGTATAGAAAGGACTTGTGATAAACTTACTGAGCTGAATATTGAC
ATTTCTTCTATCAAAGCCATTGGTGTGAGCAATCAGAGAGAAACCACTATAATTTGGGACAAATACACTGGAGAACCCCT
CTACAATGCTGTTGTATGGCTTGATCTAAGAACCCAGGGTACAGTTGAAACTTTAAGTAAAAGAATTCCAGGAAATAATA
ACTTTGTCAAGTCCAAGACTGGTCTTCCACTTAGCACTTACTTTAGTGCTGTGAAACTTCACTGGATCTTAGAAAATGTG
AGAAAAGTTAAAAAAGCTGTTGAAGAAGAAAGAGCTCTTTTTGGAACTGTTGATTCATGGCTTATCTGGAGTTTGACAGG
AGGGCCTAATGGAGGTGTCCATTGTACAGATGTAACAAATGCCAGTAGGACAATGCTTTTCAACATTCATTCTTTAGAAT
GGGATGTAGAACTATGCGAGTTTTTTGAGGTTCCTATGACAATACTTCCAAATATCCGGAGTTCTTCTGAGATCTATGGT
CTAATGAAAGCTGGGGCCTTGGAAGGTGTGCCATTATCAGGGTGCTTGGGAGACCAATCTGCTGCCTTAGTTGGACAAAT
GTGTTTCCAAGATGGACAGGCCAAAAATACATATGGAACAGGCTGTTTCCTACTATGTAACACAGGCCAAAAGTGTGTTT
TCTCTGACCATGGCCTTCTTACCACTGTGGCTTATAAACTGGGCAGAGACAAGCCAGTATGCTATGCATTGGAAGGATCT
GTTGCTATAGCTGGTGCTGTTATTCGTTGGCTAAGAGACAACCTTGGTATTTTAAAAACTTCAGAGGAAATTGAAAAACT
TGCTAAAGAGGCGGGCACTTCTTATGGCTGCTATTTTGTTCCAGCATTCTCGGGGTTATATGCACCGTACTGGGAGCCTA
GTGCAAGAGGGATTATTTGTGGCCTTACTCAGTTCACCAGTAAACAGCATATTGCTTTTGCTGCATTAGAAGCTGTTTGT
TTCCAAACAAAAGAGATTTTGGATGCCATGAATAAAGACTGTGGAATTCCACTCACCCATTTGCAAGTAGATGGAGGAAT
GACCAACAATAAAATTCTCATGCAACTTCAAGCAGATATTCTTTATATACCAGTAGTAAAGCCTTCGATGCCTGAAACAA
CAGCACTGGGTGCTGCCATGGCAGCAGGTGCTGCAGAAGGAGTTGGAGTCTGGAGTCTTGAACCTGAAGATTTATCAGCT
GTAACAATGGAACGATTTGAACCTCAGATCAATCCAGAAGAAAGTGAAATTCGTTATGCCATTTGGAAAAAAGCTGTGCA
GAAATCAATGGGCTGGGCCACAGGACAGACTTCTCCAAATGCAGGTGACCCTAATATCTTCTGTAGTGTGCCATTGGGCT
TTTTTATAGTGAGTAGCATGGTAATGTTAATCGGAGCAAGGTACATCTCAGGTATTCCATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009161 ortholog_many2many 1 retrogene
retro_amel_45,
Canis familiaris ENSCAFG00000013713 ortholog_many2many 1 retrogene
retro_cfam_19,
Callithrix jacchus ENSCJAG00000007633 ortholog_many2many 3 retrogenes
retro_cjac_125, retro_cjac_3161, retro_cjac_4035,
Cavia porcellus ENSCPOG00000003261 ortholog_many2many 2 retrogenes
retro_cpor_11, retro_cpor_20,
Equus caballus ENSECAG00000003599 ortholog_many2many 1 retrogene
retro_ecab_9,
Echinops telfairi ENSETEG00000008279 ortholog_one2many 2 retrogenes
retro_etel_2000, retro_etel_247,
Felis catus ENSFCAG00000004264 ortholog_many2many 1 retrogene
retro_fcat_140,
Homo sapiens ENSG00000198814 ortholog_many2many 4 retrogenes
retro_hsap_3087, retro_hsap_3120, retro_hsap_4885, retro_hsap_70,
Loxodonta africana ENSLAFG00000007632 ortholog_many2many 1 retrogene
retro_lafr_30,
Myotis lucifugus ENSMLUG00000001046 ortholog_many2many 2 retrogenes
retro_mluc_151, retro_mluc_853,
Mus musculus ENSMUSG00000025059 ortholog_many2many 2 retrogenes
retro_mmus_119, retro_mmus_97,
Nomascus leucogenys ENSNLEG00000010102 ortholog_one2many 2 retrogenes
retro_nleu_1650, retro_nleu_771,
Oryctolagus cuniculus ENSOCUG00000013023 ortholog_many2many 2 retrogenes
retro_ocun_2, retro_ocun_81,
Otolemur garnettii ENSOGAG00000016952 ortholog_many2many 1 retrogene
retro_ogar_261,
Pteropus vampyrus ENSPVAG00000012460 ortholog_one2many 1 retrogene
retro_pvam_1417,
Rattus norvegicus ENSRNOG00000034116 ortholog_many2many 2 retrogenes
retro_rnor_114, retro_rnor_34,
Sarcophilus harrisii ENSSHAG00000006470 ortholog_one2one 1 retrogene
retro_shar_35,
Sus scrofa ENSSSCG00000012202 ortholog_many2many 2 retrogenes
retro_sscr_479, retro_sscr_59,
Ictidomys tridecemlineatus ENSSTOG00000008732 ortholog_one2many 1 retrogene
retro_itri_1436,
Tarsius syrichta ENSTSYG00000008249 ortholog_many2many 1 retrogene
retro_tsyr_29,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_234 89.31 99.82
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Download FASTA sequences of all ENSMODG00000002417 retrocopies