Parental gene: | ENSSSCG00000013936 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 2:58287585..58296458(+) |
>ENSSSCG00000013936
ATGGCGGCATCGAAGGTGAAGCAGGACATGCCCCCACCAGGGGGCTATGGCCCTATCGACTACAAGCGGAACCTCCCACG
TCGAGGACTGTCGGGCTACAGCATGTTCGCTGTGGGCATCGGGACCTTGCTCTTCGGATACTGGAGCATGATGAAGTGGA
ACCGTGAGCGCAGGCGCCTGCAGATCGAGGACTTCGAGGCCCGAATTGCACTGATGCCTCTGTTTCAGGCAGAGAAGGAC
CGGAGAGTTCTCCAGATGCTTCGGGAGAACTTGGAGGAGGAGGCAATCATCATGAAGGATGTGCCGGACTGGAAGGTGGG
CGAGTCCGTGTTCCACACAACGCGCTGGGTCACCCCAATGATGGGTGAGCTCTATGGGCTGCGGACCAATGAAGAGATTC
TCAGCGCCACCTATGGCTTCATATGGTACACGTAG
ATGGCGGCATCGAAGGTGAAGCAGGACATGCCCCCACCAGGGGGCTATGGCCCTATCGACTACAAGCGGAACCTCCCACG
TCGAGGACTGTCGGGCTACAGCATGTTCGCTGTGGGCATCGGGACCTTGCTCTTCGGATACTGGAGCATGATGAAGTGGA
ACCGTGAGCGCAGGCGCCTGCAGATCGAGGACTTCGAGGCCCGAATTGCACTGATGCCTCTGTTTCAGGCAGAGAAGGAC
CGGAGAGTTCTCCAGATGCTTCGGGAGAACTTGGAGGAGGAGGCAATCATCATGAAGGATGTGCCGGACTGGAAGGTGGG
CGAGTCCGTGTTCCACACAACGCGCTGGGTCACCCCAATGATGGGTGAGCTCTATGGGCTGCGGACCAATGAAGAGATTC
TCAGCGCCACCTATGGCTTCATATGGTACACGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 86 .41 RPM |
| SRP014902_testis | 62 .80 RPM |
| SRP018856_adipose | 110 .90 RPM |
| SRP018288_kidney | 82 .84 RPM |
| SRP018288_lung | 37 .17 RPM |
| SRP018288_liver | 42 .38 RPM |
| SRP018288_heart | 126 .04 RPM |
| SRP035408_liver | 87 .13 RPM |
| SRP035408_brain | 130 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000034503 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000036199 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020602 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000004735 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009880 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_707 | 77.08 | 65.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_722 | 85.53 | 51.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sscr_739 | 77.08 | 65.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000013936 retrocopies