Parental gene:

BET1, ENSSSCG00000015325

Aliases:None
Description:Bet1 golgi vesicular membrane trafficking protein [Source:HGNC Symbol;Acc:14562]
Organism:Pig (Sus scrofa)
Coordinates:9:80823452..80833936(-)


>ENSSSCG00000015325
ATGAGGCGTGCAGGCCTGGGTGAAGGAGTGCCTCCTGGCAACTATGGAAACTATGGCTATCCTAATAGTGGGTATAGTGC
CTGTGAAGAAGAAAATGAGAGACTCACAGAAAGTCTGAGAAACAAAGTAACTGCTATAAAATCTCTTTCCATTGAAATAG
GCCATGAAGTTAAACATCAAAATAAATTATTAGCTGAAATGGATTCACAGTTTGATTCTACAACTGGATTTCTAGGTAAA
ACTATGGGAAAACTGAAGATTTTATCCAGAGGGAGCCAAACAAAGCTGCTGTGTTATATGATGCTGTTTTCCTTGTTTGT
CTTTTTTGTCATTTATTGGATTATTAAACTGAGGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 4 .38 RPM
SRP014902_testis 8 .35 RPM
SRP018288_heart 8 .02 RPM
SRP018288_kidney 17 .34 RPM
SRP018288_liver 52 .29 RPM
SRP018288_lung 14 .05 RPM
SRP018856_adipose 9 .73 RPM
SRP035408_brain 6 .26 RPM
SRP035408_liver 11 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003424 ortholog_one2one 1 retrogene
retro_btau_1054,
Choloepus hoffmanni ENSCHOG00000001276 ortholog_one2one 1 retrogene
retro_chof_2211,
Callithrix jacchus ENSCJAG00000013720 ortholog_one2one 3 retrogenes
retro_cjac_1411, retro_cjac_2019, retro_cjac_3155,
Dasypus novemcinctus ENSDNOG00000001012 ortholog_one2one 3 retrogenes
retro_dnov_1683, retro_dnov_393, retro_dnov_60,
Homo sapiens ENSG00000105829 ortholog_one2one 1 retrogene
retro_hsap_3809,
Gorilla gorilla ENSGGOG00000002176 ortholog_one2one 1 retrogene
retro_ggor_2560,
Loxodonta africana ENSLAFG00000000587 ortholog_one2one 1 retrogene
retro_lafr_1023,
Macaca mulatta ENSMMUG00000000007 ortholog_one2one 1 retrogene
retro_mmul_1656,
Nomascus leucogenys ENSNLEG00000015441 ortholog_one2one 1 retrogene
retro_nleu_2151,
Oryctolagus cuniculus ENSOCUG00000017029 ortholog_one2one 2 retrogenes
retro_ocun_1116, retro_ocun_355,
Ochotona princeps ENSOPRG00000004536 ortholog_one2one 4 retrogenes
retro_opri_201, retro_opri_249, retro_opri_388, retro_opri_880,
Pan troglodytes ENSPTRG00000019408 ortholog_one2one 1 retrogene
retro_ptro_2584,
Rattus norvegicus ENSRNOG00000011008 ortholog_one2one 2 retrogenes
retro_rnor_2195, retro_rnor_2196,
Tupaia belangeri ENSTBEG00000000765 ortholog_one2one 2 retrogenes
retro_tbel_3115, retro_tbel_4272,
Tarsius syrichta ENSTSYG00000009729 ortholog_one2one 2 retrogenes
retro_tsyr_136, retro_tsyr_1843,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_455 58.72 90.68
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2. retro_sscr_516 58.72 90.68
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Download FASTA sequences of all ENSSSCG00000015325 retrocopies