Parental gene: | TAX1BP3, ENSSSCG00000017866 |
| Aliases: | None |
| Description: | Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:HGNC Symbol;Acc:30684] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 12:51614251..51619119(-) |
>ENSSSCG00000017866
ATGTCCTACATTCCGGGCCAGCCGGTCACCGCCGTGGTGCAAAGAGTTGAAATTCATAAGCTGCGTCAAGGTGAGAACTT
AATCCTGGGCTTCAGCATTGGAGGTGGAATTGACCAGGATCCCTCTCAGAATCCTTTCTCAGAAGATAAGACAGACAAGG
GCATTTATGTCACGCGGGTATCTGAAGGAGGCCCAGCGGAAATTGCCGGGCTGCAGATCGGGGACAAGATCATGCAGGTG
AACGGCTGGGACATGACCATGGTCACGCACGACCAGGCCCGGAAGCGGCTCACCAAGCGCTCGGAGGAGGTGGTGCGGCT
GCTGGTGACGCGGCAGTCGCTGCAGAAGGCGGTGCAGCAGTCCATGCTGTCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 99 .15 RPM |
| SRP014902_testis | 42 .72 RPM |
| SRP018288_heart | 37 .80 RPM |
| SRP018288_kidney | 46 .99 RPM |
| SRP018288_liver | 8 .16 RPM |
| SRP018288_lung | 100 .50 RPM |
| SRP018856_adipose | 38 .48 RPM |
| SRP035408_brain | 4 .48 RPM |
| SRP035408_liver | 8 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000023829 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000013801 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000026421 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000040158 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000023903 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022920 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_365 | 70.75 | 84.68 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000017866 retrocopies