Parental gene:

SVIP, ENSSSCG00000022838

Aliases:None
Description:small VCP/p97-interacting protein [Source:HGNC Symbol;Acc:25238]
Organism:Pig (Sus scrofa)
Coordinates:2:39939039..39942228(-)


>ENSSSCG00000022838
ATGGGGCTGTGTTTTCCCTGTCCAACGGAGGAGGCGCCTCCCTCGCCAGACCCGGAAGAAAAAAGAGCAAAGCTTGCAGA
GGCTGCAGAGAGAAGACAGAAGGAGGCTGCATCTCGGGGCATTTTGGATGTTAGGTCTGTGGAAGAAAAAAGAAAGAAAA
AGGAAAAAATAGAAAAACAAATGGCTACATCTGGACCCCCACCAGAAGGTGGACTTAGAGTAAGTATTAAA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .27 RPM
SRP014902_testis 0 .71 RPM
SRP018288_heart 2 .54 RPM
SRP018288_kidney 5 .32 RPM
SRP018288_liver 1 .76 RPM
SRP018288_lung 2 .44 RPM
SRP018856_adipose 0 .80 RPM
SRP035408_brain 13 .69 RPM
SRP035408_liver 2 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013152 ortholog_one2one 4 retrogenes
retro_chof_1571, retro_chof_2005, retro_chof_2442, retro_chof_668,
Dasypus novemcinctus ENSDNOG00000016735 ortholog_one2one 4 retrogenes
retro_dnov_2035, retro_dnov_2072, retro_dnov_928, retro_dnov_945,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_446 70.18 72.73
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Download FASTA sequences of all ENSSSCG00000022838 retrocopies