Parental gene:

MMGT1, ENSSSCG00000025854

Aliases:None
Description:membrane magnesium transporter 1 [Source:HGNC Symbol;Acc:28100]
Organism:Pig (Sus scrofa)
Coordinates:X:127067830..127080692(-)


>ENSSSCG00000025854
ATGGCGCCGTCGCTCTGGAAGGGGCTGGTGGGCATCGGCCTCTTCGCCCTAGCCCACGCGGCGTTTTCCGCTGCGCAGCA
TCGTTCTTATATGCGATTAACAGAAAAGGAAGATGAATCACTGCCAATAGATATAGTTCTTCAGACACTTCTGGCCTTTG
CAGTTACCTGTTATGGTATAGTTCACATTGCAGGGGAGTTTAAAGACATGGATGCCACTTCAGAACTAAAAAATAAGACA
TTTGACACATTAAGGAATCACCCGTCATTTTATGTATTTAATCATCGCGGTCGAGTACTGTTCCGGCCTTCGGATACAAC
CAATGCTTCAAACCAAGATGCATTGTCCTCTAACACATCATTGAAGTTACGAAAACTTGAATCACTGCGTCGTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 7 .57 RPM
SRP014902_testis 14 .71 RPM
SRP018288_heart 20 .30 RPM
SRP018288_kidney 35 .07 RPM
SRP018288_liver 14 .07 RPM
SRP018288_lung 19 .45 RPM
SRP018856_adipose 14 .70 RPM
SRP035408_brain 12 .35 RPM
SRP035408_liver 9 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000025297 ortholog_one2one 2 retrogenes
retro_btau_1566, retro_btau_864,
Cavia porcellus ENSCPOG00000013476 ortholog_one2many 3 retrogenes
retro_cpor_104, retro_cpor_1171, retro_cpor_979,
Echinops telfairi ENSETEG00000005810 ortholog_one2one 1 retrogene
retro_etel_1671,
Monodelphis domestica ENSMODG00000028393 possible_ortholog 1 retrogene
retro_mdom_281,
Mus musculus ENSMUSG00000061273 ortholog_one2many 1 retrogene
retro_mmus_13,
Oryctolagus cuniculus ENSOCUG00000029505 ortholog_one2one 1 retrogene
retro_ocun_660,
Otolemur garnettii ENSOGAG00000003462 ortholog_one2many 2 retrogenes
retro_ogar_1112, retro_ogar_2224,
Rattus norvegicus ENSRNOG00000000881 ortholog_one2one 1 retrogene
retro_rnor_689,
Ictidomys tridecemlineatus ENSSTOG00000004796 ortholog_one2one 1 retrogene
retro_itri_1421,
Tupaia belangeri ENSTBEG00000011209 ortholog_one2one 1 retrogene
retro_tbel_4115,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_908 79.03 94.66
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000025854 retrocopies