Parental gene:

SRM, ENSSSCG00000027689

Aliases:None
Description:spermidine synthase [Source:HGNC Symbol;Acc:11296]
Organism:Pig (Sus scrofa)
Coordinates:6:65154803..65161685(+)


>ENSSSCG00000027689
ATGGAGCCCGGCCCCGACGGCCCCGCAGCTCCCGGCCCCGCTGCCATCCGCGAGGGCTGGTTCCACGAGACGTGCAGCCT
GTGGCCCGGCCAGGCCCTGTCTCTTCAGGTGGAGCAGCTGCTACATCATCAACGCTCGCGGTACCAGGATATCCTCGTCT
TCCGCAGTAAGAGCTATGGCAACGTGCTGGTGTTGGACGGCGTCATCCAGTGCACCGAGAGAGATGAATTCTCCTACCAG
GAGATGATAGCCAACCTGCCCCTTTGCAGCCACCCCAACCCTCGCAAGGTGCTGATCATCGGGGGCGGGGATGGGGGCGT
CCTGAGGGAGGTGGTCAAGCACCCCGCCGTGGAGTCCGTGGTCCAGTGCGAGATTGATGAGGATGTCATTCAGGTCTCTA
AGAAGTTCCTGCCAGGCATGGCTGTCAGCTACTCTAGCTCAAAGCTGACCCTGCATGTGGGCGACGGTTTTGAGTTCATG
AAACAGAACCAGGACGCCTTCGACGTCATCATCACGGACTCCTCAGACCCCATGGGCCCTGCCGAGAGTCTCTTCAAGGA
GTCCTACTACCAGCTCATGAAGACTGCCCTCAAGGAGGAGGGCATCCTGTGCTGCCAGGGCGAGTGCCAGTGGCTGCACC
TAGACCTCATCAAGGAGATGCGGCAGTTCTGCAAGTCGCTCTTCCCCGTGGTGGACTATGCCTACTGCACCATCCCCACC
TACCCCAGCGGCCAGATCGGCTTCATGCTCTGCAGCAAAAACCCAAGCACCAACTTTCGGGAGCCCGTGCAGCTGCTGAC
GCAGAAGCAGGTGGAGCAGAGGCAGCTGAGATACTACAACTCGGACGTGCACCGGGCGGCCTTTGTCCTGCCCGAGTTTG
CCCGTAAGGCCCTGAATGATGCGGACTGA

Library Parental gene expression (RPM)
SRP014902_placenta 19 .64 RPM
SRP014902_testis 40 .74 RPM
SRP018856_adipose 26 .15 RPM
SRP018288_kidney 16 .84 RPM
SRP018288_lung 13 .64 RPM
SRP018288_liver 32 .14 RPM
SRP018288_heart 8 .83 RPM
SRP035408_liver 39 .75 RPM
SRP035408_brain 57 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000014385 possible_ortholog 1 retrogene
retro_ggor_1756,
Macropus eugenii ENSMEUG00000007002 ortholog_one2many 2 retrogenes
retro_meug_1330, retro_meug_887,
Myotis lucifugus ENSMLUG00000017585 ortholog_one2one 1 retrogene
retro_mluc_2458,
Macaca mulatta ENSMMUG00000019321 possible_ortholog 2 retrogenes
retro_mmul_1500, retro_mmul_2259,
Mustela putorius furo ENSMPUG00000016435 ortholog_one2one 1 retrogene
retro_mputfur_1085,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1208 73.10 56.29
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Download FASTA sequences of all ENSSSCG00000027689 retrocopies