Parental gene: | TKTL1, ENSSTOG00000005014 |
| Aliases: | None |
| Description: | transketolase-like 1 [Source:HGNC Symbol;Acc:11835] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393619.1:1048698..1083994(+) |
>ENSSTOG00000005014
ATGGCCAAGGAGGCCAGACCCGACGAGAAGACAGTGCAGGTGTTGCGGGATATGGCTAACCGCCTGCGCATCCATTCCAT
CAGGGCCACTTGCGCTTCGAGCTCCGGCCACCCTACATCATGCAGCAGTGCTGCTGAGATCATGTCTGTGCTTTTCTTCC
ACACGATGAGATATAAACAGTCAGACCCAGAGAACCCAGACAACGACCGATTCATCCTCTCAAAGATTAACACAATACCA
TTATGTTATTCAGAGTGGCTTACATTCAGCACTGGAAATCTGCCTGACATTCTTGTCCTACAGCTGCTCCTAGGTTCATT
GGGTCCCAGACTGTCCTTTGTTGATGTGGCAACAGGATGGCTTGGGCAAGGACTGGGGGCTGCGTGTGGGATGGCATATA
CTGGCAAGTACTTTGACCAGGCCAGCTACCGTGTGTTCTGCCTCCTGGGAGATGGTGAGTCGTCTGAAGGCTCTGTCTGG
GAGGCATTGGCCTTCGCTTCCTACTACAGTCTGGATAATCTTGTGGTGATCTTTGATGTGAACCGCCTGGGACATGGTGG
CACCTTGCCCCTTGAGCACTGCATAGAAGTCTATCAGAAGCGCTGTGAAGCCTTTGGGTGGAACACTTATGTGGTGGATG
GTCGTGATGTGGAGGCACTGTGCCAGGTGTTCTGGCAAGCAGCCCAAGTGAAAAGCAAGCCCACTGCCGTGGTTGCCAAG
ACCTTCAAGGGCCGGGGCATGCCAAATGTTGAAGATGCAGAAAATTGGTATGGAAAACCAATGCCAAAAGAAAGAGCAGA
TGCAATTATCAAATTAATTGAGAGCCAGATACAGACCAACAGGAGTCTTTTACCACAACCCCCTATTGAGGATTCACCTC
AAGTCAATATCATGGATATAAAAATGACCTGTCCACCTGCTTATGAAGTTGGCGATGTGGTAGCTACTCGAAAAGCATGT
GGTTTGGCTCTAGCTAAGCTGGGCCATGCAAACAACAGAGTCATTGTGCTGGATGGTGACACCAAGAACTCCACCTTCTC
TGAGATATTCAAGAAAGAACACCCTGAACGATTCATCGAGTGTTTTATTGCTGAGCAAAACATGGTGAGCGTGGCACTGG
GCTGTGCCACCCGTGGTCGGACCATTGCTTTTGCTAGCACTTTTGCTGCCTTTTTGACCCGAGCATTTGATCAGATCCGC
ATGGGAGCCATCGCTCAAATCAACATCAACCTTATTGGTTCTCACTGTGGGGTGTCCGTTGGTGAAGATGGCCCTTCCCA
GATGGCCCTGGAAGATCTGGCTATGTTCCGAGCAGTTCCCAACTGCACTATTTTTTATCCAAGTGATGCTGTCTCCACGG
AACATGCTATTTATTTAGCAGCCAATACCAAGGGAATGTGTTTCATTCGAACCAGCCGGCCAGAAACTGCAGTTCTTTAT
ACCCCTCAAGAAACCTTTAAGATTGGACAGGCTAAGGTTGTCCGCCAAAGTGTCAATGACAAAGTCACGGTTATTGGAGC
TGGAATTACTCTGCATGAAGCCTTAGTGGCTGCTGATGATCTCTCTAAACAAGATATTTTTATCCGTGTCATTGATCTGT
TTACCATTAAACCCCTGGATGTTGCCACCATCATTTCCAATGCAAGAGCCACAGGCGGCCGGATTATCACAGTGGAGGAT
CACTACCCAGAAGGTGGCATTGGGGAAGCTGTCTCTGCAGCTGTCTCCATGGAGCCTGACATCCTGGTTCATCAGCTGGC
AGTGATGGGAGTGCCTCGGAGCGGGAGACCCAGCGAGCTGCTGGATACATTTGGAATCAGTGCCAGACACATCATTGTGG
CTGTGAAATGCATGTTGATGAACTAA
ATGGCCAAGGAGGCCAGACCCGACGAGAAGACAGTGCAGGTGTTGCGGGATATGGCTAACCGCCTGCGCATCCATTCCAT
CAGGGCCACTTGCGCTTCGAGCTCCGGCCACCCTACATCATGCAGCAGTGCTGCTGAGATCATGTCTGTGCTTTTCTTCC
ACACGATGAGATATAAACAGTCAGACCCAGAGAACCCAGACAACGACCGATTCATCCTCTCAAAGATTAACACAATACCA
TTATGTTATTCAGAGTGGCTTACATTCAGCACTGGAAATCTGCCTGACATTCTTGTCCTACAGCTGCTCCTAGGTTCATT
GGGTCCCAGACTGTCCTTTGTTGATGTGGCAACAGGATGGCTTGGGCAAGGACTGGGGGCTGCGTGTGGGATGGCATATA
CTGGCAAGTACTTTGACCAGGCCAGCTACCGTGTGTTCTGCCTCCTGGGAGATGGTGAGTCGTCTGAAGGCTCTGTCTGG
GAGGCATTGGCCTTCGCTTCCTACTACAGTCTGGATAATCTTGTGGTGATCTTTGATGTGAACCGCCTGGGACATGGTGG
CACCTTGCCCCTTGAGCACTGCATAGAAGTCTATCAGAAGCGCTGTGAAGCCTTTGGGTGGAACACTTATGTGGTGGATG
GTCGTGATGTGGAGGCACTGTGCCAGGTGTTCTGGCAAGCAGCCCAAGTGAAAAGCAAGCCCACTGCCGTGGTTGCCAAG
ACCTTCAAGGGCCGGGGCATGCCAAATGTTGAAGATGCAGAAAATTGGTATGGAAAACCAATGCCAAAAGAAAGAGCAGA
TGCAATTATCAAATTAATTGAGAGCCAGATACAGACCAACAGGAGTCTTTTACCACAACCCCCTATTGAGGATTCACCTC
AAGTCAATATCATGGATATAAAAATGACCTGTCCACCTGCTTATGAAGTTGGCGATGTGGTAGCTACTCGAAAAGCATGT
GGTTTGGCTCTAGCTAAGCTGGGCCATGCAAACAACAGAGTCATTGTGCTGGATGGTGACACCAAGAACTCCACCTTCTC
TGAGATATTCAAGAAAGAACACCCTGAACGATTCATCGAGTGTTTTATTGCTGAGCAAAACATGGTGAGCGTGGCACTGG
GCTGTGCCACCCGTGGTCGGACCATTGCTTTTGCTAGCACTTTTGCTGCCTTTTTGACCCGAGCATTTGATCAGATCCGC
ATGGGAGCCATCGCTCAAATCAACATCAACCTTATTGGTTCTCACTGTGGGGTGTCCGTTGGTGAAGATGGCCCTTCCCA
GATGGCCCTGGAAGATCTGGCTATGTTCCGAGCAGTTCCCAACTGCACTATTTTTTATCCAAGTGATGCTGTCTCCACGG
AACATGCTATTTATTTAGCAGCCAATACCAAGGGAATGTGTTTCATTCGAACCAGCCGGCCAGAAACTGCAGTTCTTTAT
ACCCCTCAAGAAACCTTTAAGATTGGACAGGCTAAGGTTGTCCGCCAAAGTGTCAATGACAAAGTCACGGTTATTGGAGC
TGGAATTACTCTGCATGAAGCCTTAGTGGCTGCTGATGATCTCTCTAAACAAGATATTTTTATCCGTGTCATTGATCTGT
TTACCATTAAACCCCTGGATGTTGCCACCATCATTTCCAATGCAAGAGCCACAGGCGGCCGGATTATCACAGTGGAGGAT
CACTACCCAGAAGGTGGCATTGGGGAAGCTGTCTCTGCAGCTGTCTCCATGGAGCCTGACATCCTGGTTCATCAGCTGGC
AGTGATGGGAGTGCCTCGGAGCGGGAGACCCAGCGAGCTGCTGGATACATTTGGAATCAGTGCCAGACACATCATTGTGG
CTGTGAAATGCATGTTGATGAACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000018441 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000021992 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000011392 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000005145 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020870 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_30 | 84.20 | 83.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000005014 retrocopies