Parental gene: | SEPT7, ENSSTOG00000021378 |
| Aliases: | None |
| Description: | septin 7 [Source:HGNC Symbol;Acc:1717] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393288.1:11419461..11528825(+) |
>ENSSTOG00000021378
CAACCGAAGAACCTTGAAGGCTATGTGGGATTTGCCAATCTTCCAAATCAAGTTTATAGAAAATCAGTGAAGAGAGGGTT
TGAATTCACACTTATGGTAGTAGGTGAATCTGGACTGGGAAAATCGACATTAATCAACTCATTATTCCTCACAGATTTGT
ATTCTCCAGAGTATCCAGGTCCATCCCATAGAATAAAAAAGACTGTGCAGGTGGAACAATCCAAAGTTTTAATCAAAGAA
GGTGGTGTCCAGTTGCTGCTCACAATAGTTGATACCCCAGGATTTGGAGATGCAGTGGATAATAGTAATTGTTGGCAGCC
TGTTATTGACTACATTGATAGTAAATTTGAGGATTATCTAAATGCAGAATCTCGAGTGAACAGACGTCAGATGCCTGATA
ACAGAGTGCAGTGTTGTTTATACTTCGTTGCTCCTTCAGGACATGGACTTAAACCATTGGACATTGAGTTTATGAAGCGT
TTGCATGAAAAAGTGAATATCATCCCACTTATCGCCAAAGCAGACACACTCACACCGGAGGAATGCCAACAATTTAAAAA
ACAGATAATGAAAGAAATTCAAGAACATAAAATTAAAATATATGAATTTCCAGAAACAGATGATGAAGAAGAAAATAAGC
TGGTTAAAAAGATAAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAATGGCAAAAGGGTC
AGAGGAAGGCAGTATCCTTGGGGTGTGGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATTCTAAGAAATATGTT
GATAAGAACACACATGCAGGACTTGAAAGATGTTACTAATAATGTACACTATGAGAACTACAGAAGCAGAAAACTGGCAG
CTGTGACTTACAATGGAGTTGATAACAATAAGAATAAAGGGCAGCTTACAAAGAGTCCTCTGGCACAAATGGAAGAAGAA
AGGAGGGAGCATGTAGCCAAGATGAAGAAGATGGAAATGGAGATGGAGCAGGTGTTTGAAATGAAGGTCAAAGAAAAAGT
TCAAAAATTGAAGGACTCTGAAGCTGAGCTACAGCGACGCCATGAGCAAATGAAAAAGAATTTGGAAGCCCAGCATAAGG
AATTAGAAGAAAAACGTCGTCAGTTTGAGGAGGAGAAAGCAAACTGGGAAGCTCAACAGCGTATTTTAGAACAACAGAAC
TCTTCGAGGACCTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA
CAACCGAAGAACCTTGAAGGCTATGTGGGATTTGCCAATCTTCCAAATCAAGTTTATAGAAAATCAGTGAAGAGAGGGTT
TGAATTCACACTTATGGTAGTAGGTGAATCTGGACTGGGAAAATCGACATTAATCAACTCATTATTCCTCACAGATTTGT
ATTCTCCAGAGTATCCAGGTCCATCCCATAGAATAAAAAAGACTGTGCAGGTGGAACAATCCAAAGTTTTAATCAAAGAA
GGTGGTGTCCAGTTGCTGCTCACAATAGTTGATACCCCAGGATTTGGAGATGCAGTGGATAATAGTAATTGTTGGCAGCC
TGTTATTGACTACATTGATAGTAAATTTGAGGATTATCTAAATGCAGAATCTCGAGTGAACAGACGTCAGATGCCTGATA
ACAGAGTGCAGTGTTGTTTATACTTCGTTGCTCCTTCAGGACATGGACTTAAACCATTGGACATTGAGTTTATGAAGCGT
TTGCATGAAAAAGTGAATATCATCCCACTTATCGCCAAAGCAGACACACTCACACCGGAGGAATGCCAACAATTTAAAAA
ACAGATAATGAAAGAAATTCAAGAACATAAAATTAAAATATATGAATTTCCAGAAACAGATGATGAAGAAGAAAATAAGC
TGGTTAAAAAGATAAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAATGGCAAAAGGGTC
AGAGGAAGGCAGTATCCTTGGGGTGTGGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATTCTAAGAAATATGTT
GATAAGAACACACATGCAGGACTTGAAAGATGTTACTAATAATGTACACTATGAGAACTACAGAAGCAGAAAACTGGCAG
CTGTGACTTACAATGGAGTTGATAACAATAAGAATAAAGGGCAGCTTACAAAGAGTCCTCTGGCACAAATGGAAGAAGAA
AGGAGGGAGCATGTAGCCAAGATGAAGAAGATGGAAATGGAGATGGAGCAGGTGTTTGAAATGAAGGTCAAAGAAAAAGT
TCAAAAATTGAAGGACTCTGAAGCTGAGCTACAGCGACGCCATGAGCAAATGAAAAAGAATTTGGAAGCCCAGCATAAGG
AATTAGAAGAAAAACGTCGTCAGTTTGAGGAGGAGAAAGCAAACTGGGAAGCTCAACAGCGTATTTTAGAACAACAGAAC
TCTTCGAGGACCTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012276 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015624 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000122545 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001175 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021167 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001673 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006015 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017639 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019080 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006545 | ortholog_one2one | 9 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000003788 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013357 | within_species_paralog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027666 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1332 | 72.73 | 51.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1736 | 80.95 | 59.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1771 | 74.70 | 59.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000021378 retrocopies