Parental gene:

RBPJ, ENSTTRG00000009022

Aliases:None
Description:recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:5724]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_2536:52849..157416(+)


>ENSTTRG00000009022
ATGTACCAGATGGAGGGCTCGCCCGCGGAGGAGCCGCCTGCGCATGCTCCATCTCTTGGAAAATTTGGTGAGCGGCCTCC
ACCTAAACGACTTACTAGGGAAGCTATGCGAAATTATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCATGCAA
AAGTTGCACAGAAGTCATATGGAAATGAAAAAAGGTTCTTTTGCCCTCCTCCTTGTGTATATCTTATGGGCAGTGGATGG
AAGAAAAAAAAAGAACAAATGGAACGCGACGGTTGTTCTGAACAAGAGTCTCAACCGTGTGCATTTATTGGAATAGGAAA
TAGTGACCAAGAAATGCAGCAGCTGAACTTGGAAGGAAAGAACTATTGCACGGCCAAAACATTGTATATATCTGATTCAG
ACAAGAGAAAGCACTTCATGCTCTCTGTAAAGATGTTCTATGGCAATAGTGATGACATTGGTGTGTTCCTCAGCAAGCGG
ATAAAAGTCATCTCCAAACCTTCCAAAAAGAAGCAGTCATTGAAAAATGCTGACTTATGCATTGCCTCAGGAACAAAGGT
GGCTCTGTTTAATCGACTTCGATCCCAGACAGTTAGTACCAGATACTTGCATGTAGAAGGAGGTAATTTCCATGCCAGTT
CTCAGCAGTGGGGAGCATTTTACATTCATCTCTTGGATGACGATGAATCAGAAGGAGAAGAATTCACAGTCCGCGATGGA
TACATCCATTATGGACAAACAGTCAAACTTGTGTGTTCAGTTACTGGCATGGCACTCCCAAGATTGATAATTAGGAAAGT
TGATAAGCAGACCGCATTACTGGATGCAGATGATCCTGTGTCACAGCTCCATAAATGTGCATTTTACCTTAAGGATACAG
AAAGAATGTACTTGTGCCTTTCTCAAGAAAGAATAATTCAGTTTCAGGCCACTCCATGCCCAAAAGAACCAAATAAAGAG
ATGATAAATGATGGCGCTTCCTGGACAATCATTAGTACGGATAAGGCAGAGTATACATTTTACGAGGGGATGGGCCCTGT
CCTTGCCCCAGTCACACCGGTGCCTGTTGTAGAAAGTCTTCAGTTGAATGGCGGTGGGGACGTAGCAATGCTTGAACTTA
CAGGACAGAATTTCACTCCAAATTTACGAGTGTGGTTTGGGGATGTAGAAGCTGAAACTATGTACAGATGTGGAGAGAGT
ATGCTCTGTGTTGTCCCAGACATTTCTGCATTCCGAGAAGGTTGGAGATGGGTCCGGCAGCCAGTCCAGGTTCCAGTAAC
TTTGGTCCGTAATGATGGAATCATTTATTCCACCAGCCTTACCTTTACCTACACCCCAGAACCGGGGCCACGGCCACATT
GCAGCGCGGCAGGAGCAATCCTTCGAGCCAACTCTAGCCAAGTGCCCCCTAATGAGTCAAACACAAACAGCGAGGGGAGT
TACACAAATGTCAGCACAAATTCAACCAATGTCACGTCATCTACAGCAACAGTTGTGTCCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003602 ortholog_one2one 1 retrogene
retro_btau_1507,
Choloepus hoffmanni ENSCHOG00000001582 ortholog_one2one 4 retrogenes
retro_chof_1172, retro_chof_1278, retro_chof_2449, retro_chof_371,
Homo sapiens ENSG00000168214 ortholog_one2one 6 retrogenes
retro_hsap_4169, retro_hsap_4171, retro_hsap_4173, retro_hsap_4174, retro_hsap_4256, retro_hsap_4316,
Gorilla gorilla ENSGGOG00000004582 ortholog_one2one 1 retrogene
retro_ggor_2853,
Mus musculus ENSMUSG00000039191 ortholog_one2one 2 retrogenes
retro_mmus_2348, retro_mmus_2819,
Nomascus leucogenys ENSNLEG00000016895 ortholog_one2one 1 retrogene
retro_nleu_2305,
Oryctolagus cuniculus ENSOCUG00000013449 ortholog_one2one 1 retrogene
retro_ocun_1445,
Pan troglodytes ENSPTRG00000015968 ortholog_one2one 1 retrogene
retro_ptro_2829,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_1151 90.11 85.00
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2. retro_ttru_1593 90.66 65.80
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Download FASTA sequences of all ENSTTRG00000009022 retrocopies