Parental gene: | acadl, ENSXETG00000001085 |
| Aliases: | None |
| Description: | acyl-CoA dehydrogenase, long chain [Source:Jamboree;Acc:XB-GENE-958719] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173300.1:482549..501898(+) |
>ENSXETG00000001085
ATGGCAGCCCGGCTAAGGTTTTTGGGAAAATCTGTTCAACAGCTAAATGGCATCAGTGGCAAGCATGTCTCTGGTACAGC
TAGAGCCGCCTCAGTGCCTGCCAGGTACCAGCACACCCAGCCCAAATCCAGTGATGAGAGGCCACGCTTAGAAACTTCTC
AAGCCAAGTCTTTAATGGACATAGGCACAAGGCGCATCTTTAGCTCAGACCATGACATCTTCAGAGAAAGCGCAAGAAAA
TTCTTTCAGCAGGAAGTGGTCCCCTACCATGCTGAGTGGGAAAAGGCAGGACAAGTTAGCCGGAACCTATGGGAGAAAGC
TGGGCAGCAGGGTCTCTTGGGTACCAGTACCCCTGAAGAGCATGGTGGCATCGGTGGTGATATTCTGTCATCTGCCATTG
TATGGGAGGAACAGATGTACGTGAACTGCACAGGCCCTGGTTTCAGTCTGCACTCGGACATTGTAATGCCTTACATCTCA
AGATATGGCAGCAAGAGCCAAGTAGAAAAATATATTCCTCAAATGACCGCTGGCAAATGTATTGGGGCTATAGCTATGAC
TGAGCCAGGCGCTGGCAGTGATTTACAGGGTGTTAGAACAAACGCCAAGAAAGATGGAAGCGACTGGATACTTAATGGCA
GTAAGGTGTTTATTACTAATGGCTGGATGAGTGATGTAGTGATTGTTGTTGCTGTCACAAACCGTGAGGCCCGCACCCCT
GCTCATGGCATCAGCCTTTTCCTTGTGGACAACGGAACTAAAGGTTTCGTTAAGGGGAGGAAACTGGAAAAAATCGGCCT
GAAGGCGCAGGACACAGCCGAATTGTTTTTTGAGGATGTACGGCTTCCTGCTGATGCTTTATTGGGACAGGAAAATAAAG
GATTTTATTACTTAATGGCAGAACTTCCCCAGGAAAGGTTACTGATTGCAGATATGGCTCTCGCTAGCTGTGAATTCATG
TTTGAGGAAACCAGGAACTATGTGAAACAGAGAAAAGCTTTTGGAAAGACTATTGCACATTTACAGACTGTACAGCACAA
GCTGGCTGAGTTGAAGACACAGATCTGTATTGGTCGTACCTTCCTGGACAACTGTCTCCAGCTTCATGCAGAGAAACGTT
TAGACTCCGCCACAGCTTCCATGGCAAAATACTGGGCATCTGATCTGCAGAATTCTGTGGCAACTCAGTGTGTCCAACTT
CATGGAGGCTGGGGATACATGTGGGAGTACCCAATAGCAAAAGCTTATGTAGATTCTCGCGTTCAACCAATCTATGGTGG
CACCAATGAGATCATGAAGGAACTTATTGCCAGAGATATTGTAAAAGAAAAGTAG
ATGGCAGCCCGGCTAAGGTTTTTGGGAAAATCTGTTCAACAGCTAAATGGCATCAGTGGCAAGCATGTCTCTGGTACAGC
TAGAGCCGCCTCAGTGCCTGCCAGGTACCAGCACACCCAGCCCAAATCCAGTGATGAGAGGCCACGCTTAGAAACTTCTC
AAGCCAAGTCTTTAATGGACATAGGCACAAGGCGCATCTTTAGCTCAGACCATGACATCTTCAGAGAAAGCGCAAGAAAA
TTCTTTCAGCAGGAAGTGGTCCCCTACCATGCTGAGTGGGAAAAGGCAGGACAAGTTAGCCGGAACCTATGGGAGAAAGC
TGGGCAGCAGGGTCTCTTGGGTACCAGTACCCCTGAAGAGCATGGTGGCATCGGTGGTGATATTCTGTCATCTGCCATTG
TATGGGAGGAACAGATGTACGTGAACTGCACAGGCCCTGGTTTCAGTCTGCACTCGGACATTGTAATGCCTTACATCTCA
AGATATGGCAGCAAGAGCCAAGTAGAAAAATATATTCCTCAAATGACCGCTGGCAAATGTATTGGGGCTATAGCTATGAC
TGAGCCAGGCGCTGGCAGTGATTTACAGGGTGTTAGAACAAACGCCAAGAAAGATGGAAGCGACTGGATACTTAATGGCA
GTAAGGTGTTTATTACTAATGGCTGGATGAGTGATGTAGTGATTGTTGTTGCTGTCACAAACCGTGAGGCCCGCACCCCT
GCTCATGGCATCAGCCTTTTCCTTGTGGACAACGGAACTAAAGGTTTCGTTAAGGGGAGGAAACTGGAAAAAATCGGCCT
GAAGGCGCAGGACACAGCCGAATTGTTTTTTGAGGATGTACGGCTTCCTGCTGATGCTTTATTGGGACAGGAAAATAAAG
GATTTTATTACTTAATGGCAGAACTTCCCCAGGAAAGGTTACTGATTGCAGATATGGCTCTCGCTAGCTGTGAATTCATG
TTTGAGGAAACCAGGAACTATGTGAAACAGAGAAAAGCTTTTGGAAAGACTATTGCACATTTACAGACTGTACAGCACAA
GCTGGCTGAGTTGAAGACACAGATCTGTATTGGTCGTACCTTCCTGGACAACTGTCTCCAGCTTCATGCAGAGAAACGTT
TAGACTCCGCCACAGCTTCCATGGCAAAATACTGGGCATCTGATCTGCAGAATTCTGTGGCAACTCAGTGTGTCCAACTT
CATGGAGGCTGGGGATACATGTGGGAGTACCCAATAGCAAAAGCTTATGTAGATTCTCGCGTTCAACCAATCTATGGTGG
CACCAATGAGATCATGAAGGAACTTATTGCCAGAGATATTGTAAAAGAAAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 15 .85 RPM |
| SRP007412_skeletal_muscle | 314 .83 RPM |
| SRP007412_heart | 307 .24 RPM |
| SRP007412_kidney | 307 .24 RPM |
| SRP007412_liver | 101 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000000487 | possible_ortholog | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000007932 | other_paralog | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000016078 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_10 | 50.52 | 86.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000001085 retrocopies