Parental gene: | gcdh, ENSXETG00000007932 |
| Aliases: | None |
| Description: | glutaryl-CoA dehydrogenase [Source:Jamboree;Acc:XB-GENE-1016447] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173084.1:689754..697570(-) |
>ENSXETG00000007932
ATGTCGGTGATGGGCAGAACGTTGCTGCTGCTGAATGCAGGGAGACGAGGGGTTGGAATCTGCACAGTGAGGGCTCAGGG
CACAGCAGCAAAACAGAAAGATATCCAGGCACAACACGAGAAGAAGAGCTCAAAATCCCGAGTCCAGTTCGACTACCAGG
ATGCCCTCAGCCTGGACTCCCAGCTGACAGAAGATGAGATTATGATACGGGACAGTTTCCGCGCTTACTGCCAGGAGAAG
CTTATGCCACGGATCCTTATGGCCAATCGCAAGGAAGTATTTGAACGGGACATCATCTCCGAGATGGGAGAGCTCGGTGT
TCTGGGATCTACAATTAAAGGATATGGCTGTGCTGGGACATCGTATGTGGCCTATGGGCTGTTGGCACGAGAGGTAGAGC
GAGTGGACAGCAGCTATCGGTCAGTTATGAGTGTCCAATCGTCTCTTGTTATGCATCCTATCGCTGCATATGGGAGTGAA
GAACAGAAGCAGAAATACCTGCCCAGGCTGGCCAGCGGAGAGTGGTTGGGGTGTTTCGGTCTCACAGAACCAAACCATGG
AAGTGACCCAGCTGGAATGGAGACCAGAGCCAGATACAATCCCTCCAGCAAGACCTACACGCTGAATGGCGCCAAAACCT
GGATCACCAATTCCCCAATAGCAGACCTGTGTGTGGTGTGGGCGATATGCGAGGACGGCAAGGTCAGGGGGTTCCTGATA
GAGAGAGGAACGAAGGGACTGTCTACCCCTAAAATAGAGGGCAAGTTCTCTCTCAGAGCCTCAGCCACTGGCATGATCCT
GTTGGAAGACGTGGAGATTCCAGAGGAAAACCTCCTCCCTAATGTTTCTGGGCTGGGGGGCCCCTTCGGTTGTCTCAATA
ATGCTCGCTATGGCATTTCCTGGGGGGCGCTGGGTGCTGCAGAATTTTGCTTTCACACAGCCAGACAGTACACCTTGGAT
AGGATCCAGTTTGGCGTTCCTCTTGCCAGGAACCAGCTTATCCAGAAGAAGTTGGCAGATATGCTGACAGACATCACCAT
TGGGTTACAGGCCTGCCTGCGGCTGGGGCGTTTGAAAGATGAAGAGAAAGCCACTCCAGAAATGATCTCCATGCTGAAGA
GGAACTCATGTGGAAAGGCCTTAGATATTGCCCGACAGGCGAGGGACATGCTGGGGGGGAATGGGATTTCAGACGAGTAC
CACATCATCAGGCACGTCATGAATCTGGAATCGGTGAACACTTACGAGGGTACCCACGATGTGCATGCACTGATCCTTGG
CAGAGCCATCACAGGGCTGCAGGCATTTACTGTAGGCAAGTGA
ATGTCGGTGATGGGCAGAACGTTGCTGCTGCTGAATGCAGGGAGACGAGGGGTTGGAATCTGCACAGTGAGGGCTCAGGG
CACAGCAGCAAAACAGAAAGATATCCAGGCACAACACGAGAAGAAGAGCTCAAAATCCCGAGTCCAGTTCGACTACCAGG
ATGCCCTCAGCCTGGACTCCCAGCTGACAGAAGATGAGATTATGATACGGGACAGTTTCCGCGCTTACTGCCAGGAGAAG
CTTATGCCACGGATCCTTATGGCCAATCGCAAGGAAGTATTTGAACGGGACATCATCTCCGAGATGGGAGAGCTCGGTGT
TCTGGGATCTACAATTAAAGGATATGGCTGTGCTGGGACATCGTATGTGGCCTATGGGCTGTTGGCACGAGAGGTAGAGC
GAGTGGACAGCAGCTATCGGTCAGTTATGAGTGTCCAATCGTCTCTTGTTATGCATCCTATCGCTGCATATGGGAGTGAA
GAACAGAAGCAGAAATACCTGCCCAGGCTGGCCAGCGGAGAGTGGTTGGGGTGTTTCGGTCTCACAGAACCAAACCATGG
AAGTGACCCAGCTGGAATGGAGACCAGAGCCAGATACAATCCCTCCAGCAAGACCTACACGCTGAATGGCGCCAAAACCT
GGATCACCAATTCCCCAATAGCAGACCTGTGTGTGGTGTGGGCGATATGCGAGGACGGCAAGGTCAGGGGGTTCCTGATA
GAGAGAGGAACGAAGGGACTGTCTACCCCTAAAATAGAGGGCAAGTTCTCTCTCAGAGCCTCAGCCACTGGCATGATCCT
GTTGGAAGACGTGGAGATTCCAGAGGAAAACCTCCTCCCTAATGTTTCTGGGCTGGGGGGCCCCTTCGGTTGTCTCAATA
ATGCTCGCTATGGCATTTCCTGGGGGGCGCTGGGTGCTGCAGAATTTTGCTTTCACACAGCCAGACAGTACACCTTGGAT
AGGATCCAGTTTGGCGTTCCTCTTGCCAGGAACCAGCTTATCCAGAAGAAGTTGGCAGATATGCTGACAGACATCACCAT
TGGGTTACAGGCCTGCCTGCGGCTGGGGCGTTTGAAAGATGAAGAGAAAGCCACTCCAGAAATGATCTCCATGCTGAAGA
GGAACTCATGTGGAAAGGCCTTAGATATTGCCCGACAGGCGAGGGACATGCTGGGGGGGAATGGGATTTCAGACGAGTAC
CACATCATCAGGCACGTCATGAATCTGGAATCGGTGAACACTTACGAGGGTACCCACGATGTGCATGCACTGATCCTTGG
CAGAGCCATCACAGGGCTGCAGGCATTTACTGTAGGCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 43 .27 RPM |
| SRP007412_skeletal_muscle | 65 .96 RPM |
| SRP007412_heart | 49 .81 RPM |
| SRP007412_kidney | 49 .81 RPM |
| SRP007412_liver | 142 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Xenopus tropicalis | ENSXETG00000001085 | other_paralog | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000016078 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_42 | 61.88 | 90.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000007932 retrocopies