Parental gene: | XB-GENE-5822524, ENSXETG00000024377 |
| Aliases: | None |
| Description: | zinc finger protein [Source:Jamboree;Acc:XB-GENE-5822524] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173312.1:328433..354804(+) |
>ENSXETG00000024377
TTCCCCTGCACCGAGTGCGGCAAGACTTTCACTCTAAAGTACAGACTGACCAAGCACCAGAGAACCCACACCGGGGAGAA
ACCCTTTAGATGCACAGAATGTGGCAAATGCTTTTCTATTAAAAACGAGCTTCAGAAACACCAGAGAATCCACACCGGGG
AGAAACCCTTCATGTGCGCAGACTGCGGGAAAAGCTTCACTCTAAAGGACCGGCTCAACAAGCACCGGAGAGTTCACACC
GGGGAAAGACCCTTCAAATGTCTGGAATGCGGCAACCGTTTCTCGGCAAAACACGGGCTTCTGAAACACCAGAGGTCCCA
CACGGGGGAGAAACCCTTCACCTGCAGCGAGTGCGGGAAAAGCTTCGCTCAGAAGAGTACGTTGGAGATCCACGAGAGAA
TTCACACAGGCGAGAGACCGTTTAAATGCAACGACTGCGGAAAGAATTTCATTCATAGCACTAACCTGCACAGCCACCAG
AAAATCCACACCGGGGAGAAACCATTCACCTGCGCCGAGTGCGGCAAAAGCTTCTCTTTGAGAAACAAACTTGTCAGACA
CCAGAAAATCCACAAATGGGAGAAACCATTCACCTGCACAGAATGTGGGAAAGGTTTTACTCAAAAGAAAACCCTCCGGA
ATCACACCAAAATTCACACAGGGGAGAGACCTTACGCTTGTACGGAATGCGGGAAAAGTTTTACTGAGAAAAAGACTCTT
CGAGACCACACCAAAATTCACACAGGGGAGAAACCCTTTACCTGCACGGAATGCGGGAAAAGCTTCACTGAGAAAAGCCA
CCTTCGAAGCCACAACAAAATTCACACCGGGGAGAAACCTTTCACCTGTACAGAATGTGGCAAAAGCTTCACTGAAAAGA
GAAACCTGCAGCACCACTACAACGTCCACACCGGGGAGAAACCCTTCACCTGCGCCGAATGCGGGAAAAGCTTTACTACG
AGCAGCAGCCTCTGTAACCACAAGCGAATTCACAGAGAGGAGAGGCCTTATTCGTGTTCGGACTGCGGCAAATCATTCTA
CGTCAAGAGCCACCTTCTAAACCACCAAAACACTCACACGGGGGAGAAACCGTTCAGCTGCACGGAATGCGGGAAGTGTT
TTACCGAAAAGGGGACCCTTCGCATGCATCAAAAAATCCACACGGGGGAGAAACCGTATACCTGCACGGAATGTGGGAAG
TGTTTCACCGAAAAGAAAAACCTTCGGCGGCACCATCACAACAAAATTCACACTGGGGAGAAACCATTCATCTGTACAGA
ATGCGGGAAAGGTTTTACTCAAAAGACAAGTCTTCTAAATCACAACAAAATCCACACTGGAGAGAAACCTTTTACGTGTA
CAGAATGTGGGAGAAGTTTTACTGAAAAGAAAACTCTGCGAAACCACAGCAAAATTCATACCGGAGAGAAACCATTCACC
TGTTCTGATTGTGGGAAAAGTTTTGCTCAAATTATAAGCCTTCAAAACCACGTCACAATTCACACCGGAGAGAAACCATT
CACCTGTACAGAATGTGGGAAAAGTTTTTCTGAAAGGAAAACCCTTCGAGACCACAGCAAAATTCATACCGGAGAGAAAC
CATTCACCTGCACAGATTGTGGGAAAAGTTTTATTCAAAGGAAAACCCTCCGGAATCACACCAAAATTCACACAGGGGAG
AGACCTTACGCTTGTACGGAATGCGGGAAAAGTTTTACTGAGAAAAAGACTCTTCGAGACCACACCAAAATTCACACAGG
GGAGAAACCCTTTACCTGCACGGAATGCGGGAAAAGCTTCACTGAGAAAAGCCACCTTCGAAGCCACAACAAAATTCACA
CCGGGGAGAAACCTTTCACCTGTACAGAATGTGGCAAAAGCTTCACTGAAAAGAGAAACCTGCAGCACCACTACAACGTC
CACACCGGGGAGAAACCATATACATGTGCAGACTGTGGTAAAGCATTCTCTCAAAAAATCAACCTTCAGAATCACCAGAA
TATTCACACAGGGGAGAAACCATTCACCTGTTCCGAATGTGGAAAAAGCTTGGCTTGTAAGGGCAGTCTTGAAAGGCACC
AAATGAGTCACATTGGTGTGAAACCTTTTACCTGTACGGAATGCGGGAAAAGTTTCACGGAAAAGAATAGCCTTCGGAAA
CACGAAAGAATTCACACCGGAGAGAAACCGTTCAGTTGCATAGAATGCGGGAGAAGTTTTAATTTGAAACACAACCTTGA
AAAACATAAAAAAAGTCACACGGGAGAGAAACCGTTCACCTGTACAGAATGTGGGAGGAGCTTTACTAAAAAGAGCACCC
TTCATATTCATCAGACTAGTCACACTGGGGAGAAACCATTTACTTGTACGGAATGTGGGAGAGGTTTCACTGATAAGAAC
AACCTTAAAAATCACAAAAGAATTCACACTGGAGAGAAACCATTCACCTGTACAGAGTGTGGGAAATGTTTTACTGAAAG
GGGGGCCGTTCGTGTTCACAAAAAAGTTCACACAGGGGAGAAACCATGCCAGTGC
TTCCCCTGCACCGAGTGCGGCAAGACTTTCACTCTAAAGTACAGACTGACCAAGCACCAGAGAACCCACACCGGGGAGAA
ACCCTTTAGATGCACAGAATGTGGCAAATGCTTTTCTATTAAAAACGAGCTTCAGAAACACCAGAGAATCCACACCGGGG
AGAAACCCTTCATGTGCGCAGACTGCGGGAAAAGCTTCACTCTAAAGGACCGGCTCAACAAGCACCGGAGAGTTCACACC
GGGGAAAGACCCTTCAAATGTCTGGAATGCGGCAACCGTTTCTCGGCAAAACACGGGCTTCTGAAACACCAGAGGTCCCA
CACGGGGGAGAAACCCTTCACCTGCAGCGAGTGCGGGAAAAGCTTCGCTCAGAAGAGTACGTTGGAGATCCACGAGAGAA
TTCACACAGGCGAGAGACCGTTTAAATGCAACGACTGCGGAAAGAATTTCATTCATAGCACTAACCTGCACAGCCACCAG
AAAATCCACACCGGGGAGAAACCATTCACCTGCGCCGAGTGCGGCAAAAGCTTCTCTTTGAGAAACAAACTTGTCAGACA
CCAGAAAATCCACAAATGGGAGAAACCATTCACCTGCACAGAATGTGGGAAAGGTTTTACTCAAAAGAAAACCCTCCGGA
ATCACACCAAAATTCACACAGGGGAGAGACCTTACGCTTGTACGGAATGCGGGAAAAGTTTTACTGAGAAAAAGACTCTT
CGAGACCACACCAAAATTCACACAGGGGAGAAACCCTTTACCTGCACGGAATGCGGGAAAAGCTTCACTGAGAAAAGCCA
CCTTCGAAGCCACAACAAAATTCACACCGGGGAGAAACCTTTCACCTGTACAGAATGTGGCAAAAGCTTCACTGAAAAGA
GAAACCTGCAGCACCACTACAACGTCCACACCGGGGAGAAACCCTTCACCTGCGCCGAATGCGGGAAAAGCTTTACTACG
AGCAGCAGCCTCTGTAACCACAAGCGAATTCACAGAGAGGAGAGGCCTTATTCGTGTTCGGACTGCGGCAAATCATTCTA
CGTCAAGAGCCACCTTCTAAACCACCAAAACACTCACACGGGGGAGAAACCGTTCAGCTGCACGGAATGCGGGAAGTGTT
TTACCGAAAAGGGGACCCTTCGCATGCATCAAAAAATCCACACGGGGGAGAAACCGTATACCTGCACGGAATGTGGGAAG
TGTTTCACCGAAAAGAAAAACCTTCGGCGGCACCATCACAACAAAATTCACACTGGGGAGAAACCATTCATCTGTACAGA
ATGCGGGAAAGGTTTTACTCAAAAGACAAGTCTTCTAAATCACAACAAAATCCACACTGGAGAGAAACCTTTTACGTGTA
CAGAATGTGGGAGAAGTTTTACTGAAAAGAAAACTCTGCGAAACCACAGCAAAATTCATACCGGAGAGAAACCATTCACC
TGTTCTGATTGTGGGAAAAGTTTTGCTCAAATTATAAGCCTTCAAAACCACGTCACAATTCACACCGGAGAGAAACCATT
CACCTGTACAGAATGTGGGAAAAGTTTTTCTGAAAGGAAAACCCTTCGAGACCACAGCAAAATTCATACCGGAGAGAAAC
CATTCACCTGCACAGATTGTGGGAAAAGTTTTATTCAAAGGAAAACCCTCCGGAATCACACCAAAATTCACACAGGGGAG
AGACCTTACGCTTGTACGGAATGCGGGAAAAGTTTTACTGAGAAAAAGACTCTTCGAGACCACACCAAAATTCACACAGG
GGAGAAACCCTTTACCTGCACGGAATGCGGGAAAAGCTTCACTGAGAAAAGCCACCTTCGAAGCCACAACAAAATTCACA
CCGGGGAGAAACCTTTCACCTGTACAGAATGTGGCAAAAGCTTCACTGAAAAGAGAAACCTGCAGCACCACTACAACGTC
CACACCGGGGAGAAACCATATACATGTGCAGACTGTGGTAAAGCATTCTCTCAAAAAATCAACCTTCAGAATCACCAGAA
TATTCACACAGGGGAGAAACCATTCACCTGTTCCGAATGTGGAAAAAGCTTGGCTTGTAAGGGCAGTCTTGAAAGGCACC
AAATGAGTCACATTGGTGTGAAACCTTTTACCTGTACGGAATGCGGGAAAAGTTTCACGGAAAAGAATAGCCTTCGGAAA
CACGAAAGAATTCACACCGGAGAGAAACCGTTCAGTTGCATAGAATGCGGGAGAAGTTTTAATTTGAAACACAACCTTGA
AAAACATAAAAAAAGTCACACGGGAGAGAAACCGTTCACCTGTACAGAATGTGGGAGGAGCTTTACTAAAAAGAGCACCC
TTCATATTCATCAGACTAGTCACACTGGGGAGAAACCATTTACTTGTACGGAATGTGGGAGAGGTTTCACTGATAAGAAC
AACCTTAAAAATCACAAAAGAATTCACACTGGAGAGAAACCATTCACCTGTACAGAGTGTGGGAAATGTTTTACTGAAAG
GGGGGCCGTTCGTGTTCACAAAAAAGTTCACACAGGGGAGAAACCATGCCAGTGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 9 .55 RPM |
| SRP007412_skeletal_muscle | 1 .17 RPM |
| SRP007412_heart | 3 .48 RPM |
| SRP007412_kidney | 3 .48 RPM |
| SRP007412_liver | 3 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000022348 | possible_ortholog | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000024100 | possible_ortholog | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000024147 | possible_ortholog | 1 retrogene | |
| Danio rerio | ENSDARG00000089344 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_31 | 59.95 | 50.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000024377 retrocopies