Common name: Zebrafish
Latin name: Danio rerio
Genome assembly: Zv9
All retrocopies: 34
Parental genes: 29

Summary: Number of retrocopies :
Conserved ORF: 23 ORF 11 ORF
Expressed retrocopies (EST): 6 EST 28 EST

# RetrogeneDB ID Identity Coverage ORF conservation Expression evidence
1. retro_drer_1 97.42 % 61.32 % ORF EST
2. retro_drer_2 84.06 % 99.95 % ORF EST
3. retro_drer_3 75.66 % 98.93 % ORF EST
4. retro_drer_4 75.42 % 95.04 % ORF EST
5. retro_drer_5 97.62 % 100.00 % ORF EST
6. retro_drer_6 73.39 % 87.40 % ORF EST
7. retro_drer_7 51.76 % 56.03 % ORF EST
8. retro_drer_8 60.00 % 69.87 % ORF EST
9. retro_drer_9 56.04 % 96.81 % ORF EST
10. retro_drer_10 53.78 % 59.06 % ORF EST
11. retro_drer_11 86.20 % 99.69 % ORF EST
12. retro_drer_12 82.24 % 100.00 % ORF EST
13. retro_drer_13 59.57 % 97.89 % ORF EST
14. retro_drer_14 52.26 % 62.26 % ORF EST
15. retro_drer_15 93.29 % 93.71 % ORF EST
16. retro_drer_16 72.76 % 90.55 % ORF EST
17. retro_drer_17 98.35 % 100.00 % ORF EST
18. retro_drer_18 79.59 % 100.00 % ORF EST
19. retro_drer_19 64.20 % 68.36 % ORF EST
20. retro_drer_20 87.64 % 57.52 % ORF EST
21. retro_drer_21 61.41 % 93.43 % ORF EST
22. retro_drer_22 94.59 % 66.27 % ORF EST
23. retro_drer_23 96.37 % 58.66 % ORF EST
24. retro_drer_24 51.49 % 51.34 % ORF EST
25. retro_drer_25 52.78 % 68.63 % ORF EST
26. retro_drer_26 83.33 % 61.22 % ORF EST
27. retro_drer_27 80.67 % 60.71 % ORF EST
28. retro_drer_29 74.13 % 72.45 % ORF EST
29. retro_drer_30 72.73 % 72.45 % ORF EST
30. retro_drer_32 77.50 % 61.54 % ORF EST
31. retro_drer_33 81.95 % 100.00 % ORF EST
32. retro_drer_34 53.33 % 56.86 % ORF EST
33. retro_drer_36 93.48 % 60.13 % ORF EST
34. retro_drer_37 55.00 % 57.84 % ORF EST
# Ensembl ID Symbol Description
1. ENSDARG00000086035 CABZ01062563.1
2. ENSDARG00000096024 si:ch211-178j18.4 si:ch211-178j18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-148]
3. ENSDARG00000088989 si:dkey-241l7.5 si:dkey-241l7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-237]
4. ENSDARG00000010246 prmt1 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
5. ENSDARG00000086430 CABZ01044775.1
6. ENSDARG00000090390 FP016235.1
7. ENSDARG00000019332 ndufb4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
8. ENSDARG00000057718 NPY2R (1 of 3) neuropeptide Y receptor Y2 [Source:HGNC Symbol;Acc:7957]
9. ENSDARG00000079681 CABZ01059627.1
10. ENSDARG00000053961 SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11 [Source:HGNC Symbol;Acc:14239]
11. ENSDARG00000023290 fabp3 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
12. ENSDARG00000067815 LINGO3 (1 of 2) leucine rich repeat and Ig domain containing 3 [Source:HGNC Symbol;Acc:21206]
13. ENSDARG00000011519 zgc:114164 zgc:114164 [Source:ZFIN;Acc:ZDB-GENE-050626-112]
14. ENSDARG00000075128 or103-5 odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
15. ENSDARG00000008109 eef1da elongation factor-1, delta, a [Source:ZFIN;Acc:ZDB-GENE-040426-2740]
16. ENSDARG00000021647 gnai1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1310]
17. ENSDARG00000020610 tnnt2a troponin T2a, cardiac [Source:ZFIN;Acc:ZDB-GENE-000626-1]
18. ENSDARG00000067593 SCO1 SCO1 cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:10603]
19. ENSDARG00000079958 hcar1-2 hydroxycarboxylic acid receptor 1-2 [Source:ZFIN;Acc:ZDB-GENE-111111-6]
20. ENSDARG00000022098 opn4a opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
21. ENSDARG00000044755 GCNT4 (3 of 3) glucosaminyl (N-acetyl) transferase 4, core 2 [Source:HGNC Symbol;Acc:17973]
22. ENSDARG00000037350 rpl9 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
23. ENSDARG00000022340 ufc1 ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
24. ENSDARG00000089344 BX640461.1
25. ENSDARG00000011934 gyg1a glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
26. ENSDARG00000018006 vrk1 vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
27. ENSDARG00000070723 ndufa9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 [Source:ZFIN;Acc:ZDB-GENE-050320-20]
28. ENSDARG00000053058 rps11 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
29. ENSDARG00000071430 smyhc1 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
Retrogenes FASTA BED
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Parental genes FASTA BED
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