RetrogeneDB ID: | retro_chof_2015 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_4556:19265..19490(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LYRM7 | ||
Ensembl ID: | ENSCHOG00000006766 | ||
Aliases: | None | ||
Description: | LYR motif containing 7 [Source:HGNC Symbol;Acc:28072] |
Percent Identity: | 94.67 % |
Parental protein coverage: | 76.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VLQLFKTLHRTRQQVFKNDTRTLEAARIKINEEFKNNKSETSPKKIEELMKIGSDVELFLRTSVIQGVHT |
VLQLF.TL.RTRQQVFKNDTR.LEAARIKINEEFKNNKSETSPKKIEELMKIGSDVELFLRTSVI.GVHT | |
Retrocopy | VLQLFNTLQRTRQQVFKNDTRALEAARIKINEEFKNNKSETSPKKIEELMKIGSDVELFLRTSVILGVHT |
Parental | DHNTL |
DHNTL | |
Retrocopy | DHNTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017776 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000000736 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000006766 | 6 retrocopies |
retro_chof_1440, retro_chof_2015 , retro_chof_2366, retro_chof_2681, retro_chof_488, retro_chof_688,
|
Echinops telfairi | ENSETEG00000010130 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000166 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000015568 | 4 retrocopies | |
Rattus norvegicus | ENSRNOG00000045961 | 1 retrocopy |