RetrogeneDB ID: | retro_dord_641 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_45653:4121..4576(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000012060 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.01 % |
Parental protein coverage: | 92.68 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMK-AMQSLKSRGYVKEQFAWRHFYW |
.LMPKKN.IAIY.LLFKEGVMVAKK.VHMPKHPELADKN.PNL.VMK.AM.S.KSRGY.KEQFAWRHFYW | |
Retrocopy | ILMPKKNLIAIY*LLFKEGVMVAKKGVHMPKHPELADKNLPNLQVMK<AMKSCKSRGYLKEQFAWRHFYW |
Parental | YLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGADKK |
.L.N.GIQYL.DYLHLPPEIV.ATL..SRPETGRP.PKGLEG..P.RLTR.EA.RDTYR.SAVPPGADKK | |
Retrocopy | HLSNKGIQYLYDYLHLPPEIVLATLCCSRPETGRPLPKGLEGKWPTRLTRVEAARDTYRQSAVPPGADKK |
Parental | AEAGAGSATEFQF |
AEAG.G.ATEFQF | |
Retrocopy | AEAGSGPATEFQF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |