RetrogeneDB ID: | retro_lafr_547 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_20:37805164..37805591(-) | ||
Located in intron of: | ENSLAFG00000002742 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RWDD2B | ||
Ensembl ID: | ENSLAFG00000004504 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.03 % |
Parental protein coverage: | 50.34 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MTELEQAEAQLSELELLASMFPSEKEFVVNDQLALAELKDCVEKKTTEGRSSKIY-FTVNINLDVSEEAM |
.TE.EQAEAQ..ELELLA.MFPS.K.F.V.DQLALAELKD..EKKT.EGRSSKIY....N...DVSEEAM | |
Retrocopy | ITEIEQAEAQPPELELLAVMFPSNK-FIVPDQLALAELKDNIEKKTIEGRSSKIY>VSINL--DVSEEAM |
Parental | VTFSLACVLPFKYPAVLPEITVRSVFLSRSQQTQLNTDLHAYLQKNCCGDVCILNATDWVREHASGYVSR |
V.FSL.C.L.FKYPAV.PEITVRS..LSRSQQ.QLNTDL.AYL.KNC.GDVCILNAT............. | |
Retrocopy | VMFSLTCIL-FKYPAVRPEITVRSILLSRSQQSQLNTDLNAYLEKNCYGDVCILNATELCQQRHHIFCHH |
Parental | DATSSTT |
...S.TT | |
Retrocopy | RKYSATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Loxodonta africana | ENSLAFG00000004504 | 1 retrocopy |
retro_lafr_547 ,
|
Ictidomys tridecemlineatus | ENSSTOG00000027590 | 1 retrocopy |