RetrogeneDB ID: | retro_meug_1481 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold421406:374..713(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000008864 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | THOC7 | ||
Ensembl ID: | ENSMEUG00000006342 | ||
Aliases: | None | ||
Description: | THO complex 7 homolog (Drosophila) [Source:HGNC Symbol;Acc:29874] |
Percent Identity: | 85.09 % |
Parental protein coverage: | 93.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SITGAHEKITECKKQILQAKRIRKNRQEYDALAKVIQHHPDRHETLKELDALGKELQHLSHIKENVEDKL |
SITGAHEKITECK.QILQAKRI.KN.QEYD.LAKV.QHHPDRHETLKELDALGKEL.HLSHIKENVEDKL | |
Retrocopy | SITGAHEKITECKQQILQAKRIWKNPQEYDVLAKVTQHHPDRHETLKELDALGKEL-HLSHIKENVEDKL |
Parental | ELRRKQFHVLLSTIHELQQTLENDEKLSEVEESQETSMETETKP |
ELR.K.FHV.LSTI.ELQQTL.NDEK..EV.E.QETSME.E.KP | |
Retrocopy | ELRGK*FHVFLSTIPELQQTLGNDEKFPEVDEVQETSMEIEKKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000034899 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000015076 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000006342 | 4 retrocopies | |
Myotis lucifugus | ENSMLUG00000012060 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000003009 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000021860 | 1 retrocopy | |
Sorex araneus | ENSSARG00000013894 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000011615 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000007069 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000013618 | 3 retrocopies |