RetrogeneDB ID: | retro_meug_1599 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold47499:13614..13979(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | THOC7 | ||
Ensembl ID: | ENSMEUG00000006342 | ||
Aliases: | None | ||
Description: | THO complex 7 homolog (Drosophila) [Source:HGNC Symbol;Acc:29874] |
Percent Identity: | 69.11 % |
Parental protein coverage: | 99.18 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KIYKDIESSITGAHEKI-TECKKQILQAKRIRKNRQEYDALAKVIQHHPDRHETLKELDALGKELQHLSH |
KIYKDIE.S..G........CKKQILQAK.I.KN.QEYD.LAK..QHH.DRHETLKELDA.GKE.QHLSH | |
Retrocopy | KIYKDIENSTAGVQXXXXAKCKKQILQAKQI*KNLQEYDSLAKATQHHTDRHETLKELDA*GKESQHLSH |
Parental | IKENVEDKLELRRKQFHVLLSTIHELQQTLENDEKL-SEVEESQETSMETETK |
I.ENVEDK.ELR.K..HV.L.TIH.LQ.TLENDEKL...VE..QE..ME..TK | |
Retrocopy | IIENVEDKVELRQKELHVFLCTIHKLQ*TLENDEKL<LQVEKAQEAVMEIGTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000034899 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000015076 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000006342 | 4 retrocopies | |
Myotis lucifugus | ENSMLUG00000012060 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000003009 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000021860 | 1 retrocopy | |
Sorex araneus | ENSSARG00000013894 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000011615 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000007069 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000013618 | 3 retrocopies |