RetrogeneDB ID: | retro_meug_929 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold23523:6780..7233(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CLNS1A | ||
Ensembl ID: | ENSMEUG00000005935 | ||
Aliases: | None | ||
Description: | chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080] |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ELKETAMAEGEEDEDSDEDVEPIAEFRFVPSDKSALEALFAAMCECQALHPDPEDEDSDDYDGEEYDVEA |
ELKETAMAEGEEDEDSDEDVEPIAEFRFVPSDKSALEALFAAMCECQALHPDPEDEDSDDYDGEEYDVEA | |
Retrocopy | ELKETAMAEGEEDEDSDEDVEPIAEFRFVPSDKSALEALFAAMCECQALHPDPEDEDSDDYDGEEYDVEA |
Parental | HEQGQGDIPTFYTYEEGLSHLTAEGQATLERLEGMLAQSVSSQYNMAGVRTEDSVRDYEDGMEIDTTPTV |
HEQGQGDIPTFYTYEEGLSHLTAEGQATLERLEGMLAQSVSSQYNMAGVRTEDSVRDYEDGMEIDTTPTV | |
Retrocopy | HEQGQGDIPTFYTYEEGLSHLTAEGQATLERLEGMLAQSVSSQYNMAGVRTEDSVRDYEDGMEIDTTPTV |
Parental | AGQFEDADVDH |
AGQFEDADVDH | |
Retrocopy | AGQFEDADVDH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000019930 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000004900 | 6 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000007254 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000014927 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000005260 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000008188 | 1 retrocopy | |
Felis catus | ENSFCAG00000026321 | 1 retrocopy | |
Homo sapiens | ENSG00000074201 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000003091 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000005935 | 4 retrocopies | |
Myotis lucifugus | ENSMLUG00000024623 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000015944 | 1 retrocopy | |
Mus musculus | ENSMUSG00000025439 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000016699 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000024393 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000003712 | 1 retrocopy | |
Sorex araneus | ENSSARG00000009460 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000027980 | 3 retrocopies | |
Tupaia belangeri | ENSTBEG00000001316 | 1 retrocopy |