RetrogeneDB ID: | retro_mputfur_1280 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897066.1:1579098..1579781(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMPUG00000005502 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSMPUG00000007948 | ||
Aliases: | None | ||
Description: | ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293] |
Percent Identity: | 96.07 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMH |
MASGCKIG.SILNSDLANLGAEC.RMLDSGADYLHL.VMDGHFVPNITFGHPVVESLRKQLGQD.FFDMH | |
Retrocopy | MASGCKIGLSILNSDLANLGAECFRMLDSGADYLHLVVMDGHFVPNITFGHPVVESLRKQLGQDLFFDMH |
Parental | MMVSRPEQWVKPMAVAGANQYTFHLEATEN-PGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMAL |
MMVSRPEQWVKPMA.AGANQYTFHLEATEN.PG.LIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMAL | |
Retrocopy | MMVSRPEQWVKPMAMAGANQYTFHLEATEN<PGVLIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMAL |
Parental | VMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMRSDDPRSV |
VMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIM..DDPRSV | |
Retrocopy | VMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMKNDDPRSV |
Parental | INLLRNVCSEAAQKRSLDR |
INLLRNVCSEAAQKRSLDR | |
Retrocopy | INLLRNVCSEAAQKRSLDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |